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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:06:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 5, clone: LjT21E22, TM0494.
AP007389.2:81888-81907
TCCATATTTCTGCAAGTAATACCCATGTAG81888TTTCGCTTGAGTCAATGTAGTAATTAAGAAAGCAAGGATTGTTATTCTTA
Lotus japonicus genomic DNA, chromosome 5, clone: LjB11K16, BM1460.
AP010471.1:36709-36728
TCCATATTTCTGCAAGTAATACCCATGTAG36709TTTCGCTTGAGTCAATGTAGTAATTAAGAAAGCAAGGATTGTTATTCTTA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:45760171-45760190
TCCATATTTCTGCAAGTAATACCCATGTAG45760171TTTCGCTTGAGTCAATGTAGTAATTAAGAAAGCAAGGATTGTTATTCTTA
Persicaria maculosa genome assembly, chromosome: 13.
OY998263.1:40931054-40931073
CCCCAATCATGGGGTCCGCCTTCAAATGGA40931054TTTCGCTTGAGTCAATGTAGGACTCGTCTAATCCCGGCTAGGCCCAGGTG
Camptogramma bilineatum genome assembly, chromosome: 12.
OY292462.1:3219225-3219244
GCAAACTGGACCAACAGGACTGACTATTAC3219225TTTCGCTTGAGTCAATGTAGCCTTAGTCAATCAATATTGGTAATGTCTTG
Aplocera efformata genome assembly, chromosome: 15.
OV121053.1:2876915-2876934
TCTTTCATCCAGAAATATATTTGACTAAAT2876915CTACATTGACTCAAGCGAAACCGCGGCAAAAAGCTATTGGGTAATTCATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCGCTTGAGTCAATGTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCGCTTGAGTCAATGTAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.159 | 0.151 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCGCTTGAGTCAATGTAG&k=0&no_gap=0&offset=0&limit=50
0.248 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=CTACATTGACTCAAGCGAAA&k=0&no_gap=0&offset=0&limit=45
0.249 | 0.001 | cgi_end;

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