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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:01:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Musa troglodytarum cultivar karat chromosome 6.
CP097508.1:55037699-55037718
ATGAGCCTGGAAATCGAGAGAGCCGCCTCC55037699TTTCTCGCTGACCTGGAAATGGGGTCGGTGGTGGCGGCGGCGGAGCCTTC
Musa acuminata subsp. malaccensis isolate AA chromosome 6.
CP126375.1:41230736-41230755
ATGAGCCTGGAAATCGAGAGAGCCGCCTCC41230736TTTCTCGCTGACCTGGAAATGGGGTCGGTGCTGGCGGCGGAGCCTTCCCC
Musa acuminata subsp. malaccensis isolate AA chromosome 17.
CP126386.1:40028640-40028659
ATGAGCCTGGAAATCGAGAGAGCCGCCTCC40028640TTTCTCGCTGACCTGGAAATGGGGTCGGTGCTGGCGGCGGAGCCTTCCCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A06.
HG996471.1:40933152-40933171
ATGAGCCTGGAAATCGAGAGAGCCGCCTCC40933152TTTCTCGCTGACCTGGAAATGGGGTCGGTGCTGGCGGCGGAGCCTTCCCC
Musa schizocarpa genome assembly, chromosome: S06.
LS990921.1:44829902-44829921
ATGAGCCTGGAAATCGAGAGAGCCGCCTCC44829902TTTCTCGCTGACCTGGAAATGGGGTCGGTGCTGGCGGCGGAGCCTTCCCC
Stelis phaeoptera genome assembly, chromosome: 3.
OX030932.1:7469003-7469022
AATCGATTCAAGGCAATCCAATTTCTTCGA7469003TTTCTCGCTGACCTGGAAATAAAGAACCCATTCCAGTAACGTATTTTTCT
TSA: Musa acuminata AAA Group Unigene80051_B1 mRNA sequence.
JV348006.1:432-451
GGGGAAGGCTCCGCCGCCAGCACCGACCCC432ATTTCCAGGTCAGCGAGAAAGGAGGCGGCTCTCTCGATTTCCAGGCTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTCTCGCTGACCTGGAAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTCTCGCTGACCTGGAAAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.189 | 0.180 | search_plus_done; http://172.18.8.135:50400/match?q=TTTCTCGCTGACCTGGAAAT&k=0&no_gap=0&offset=0&limit=50
0.280 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=ATTTCCAGGTCAGCGAGAAA&k=0&no_gap=0&offset=0&limit=44
0.281 | 0.001 | cgi_end;

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