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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 08:29:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS17028G01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078142.1:317-340
TAACTGAATTGGACATTTTTGCAAATAGCC317TTTGAAGTTCCATTTTCCCCTACCAAATTTACATTCTCCATTGTAATTCCTTCA
KS17057D01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080835.1:342-365
TAACTGAATTGGACATTTTTGCAAATAGCC342TTTGAAGTTCCATTTTCCCCTACCAAATTTACATTCTCCATTGTAATTCCTTCA
KS17060G01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD081155.1:304-327
TAACTGAATTGGACATTTTTGCAAATAGCC304TTTGAAGTTCCATTTTCCCCTACCAAATTTACATTCTCCATTGTAATTCCTTCA
BJ02030E02 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO908406.1:469-492
TGAAGGAATTACAATGGAGAATGTAAATTT469GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCANAAATGTCCAATTCAGTTA
BJ03017F01 BJ03 Capsicum annuum cDNA 5', mRNA sequence.
CO911308.1:373-396
TGAAGGAATTACAATGGAGAATGTAAATTT373GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS16037F12 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072941.1:324-347
TGAAGGAATTACAATGGAGAATGTAAATTT324GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17001F11 KS17 Capsicum annuum cDNA, mRNA sequence.
GD075581.1:321-344
TGAAGGAATTACAATGGAGAATGTAAATTT321GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17004E01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD075844.1:445-468
TGAAGGAATTACAATGGAGAATGTAAATTT445GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17009A01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD076273.1:571-594
TGAAGGAATTACAATGGAGAATGTAAATTT571GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17009D03 KS17 Capsicum annuum cDNA, mRNA sequence.
GD076311.1:461-484
TGAAGGAATTACAATGGAGAATGTAAATTT461GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17012B07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD076577.1:571-594
TGAAGGAATTACAATGGAGAATGTAAATTT571GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17012H07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD076647.1:568-591
TGAAGGAATTACAATGGAGAATGTAAATTT568GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17016A09 KS17 Capsicum annuum cDNA, mRNA sequence.
GD076945.1:324-347
TGAAGGAATTACAATGGAGAATGTAAATTT324GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17017G11 KS17 Capsicum annuum cDNA, mRNA sequence.
GD077114.1:522-545
TGAAGGAATTACAATGGAGAATGTAAATTT522GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17028E03 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078121.1:661-684
TGAAGGAATTACAATGGAGAATGTAAATTT661GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17032A11 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078458.1:649-672
TGAAGGAATTACAATGGAGAATGTAAATTT649GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17034A01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD078638.1:590-613
TGAAGGAATTACAATGGAGAATGTAAATTT590GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17040D03 KS17 Capsicum annuum cDNA, mRNA sequence.
GD079238.1:626-649
TGAAGGAATTACAATGGAGAATGTAAATTT626GGTAGGGGAAAATGGAACTTCAAAGGCTATT
KS17051C04 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080258.1:301-324
TGAAGGAATTACAATGGAGAATGTAAATTT301GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17052H07 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080413.1:501-524
TGAAGGAATTACAATGGAGAATGTAAATTT501GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17055A12 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080619.1:645-668
TGAAGGAATTACAATGGAGAATGTAAATTT645GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17056F08 KS17 Capsicum annuum cDNA, mRNA sequence.
GD080771.1:516-539
TGAAGGAATTACAATGGAGAATGTAAATTT516GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17062D01 KS17 Capsicum annuum cDNA, mRNA sequence.
GD081307.1:440-463
TGAAGGAATTACAATGGAGAATGTAAATTT440GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
KS17063H08 KS17 Capsicum annuum cDNA, mRNA sequence.
GD081455.1:477-500
TGAAGGAATTACAATGGAGAATGTAAATTT477GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
TSA: Capsicum annuum MGMT_Contig21934, mRNA sequence.
JW072178.1:1368-1391
TGAAGGAATTACAATGGAGAATGTAAATTT1368GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:237288110-237288133
TGAAGGAATTACAATGGAGAATGTAAATTT237288110GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:241805698-241805721
TGAAGGAATTACAATGGAGAATGTAAATTT241805698GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA
Capsicum annuum polygalacturonase (PG) mRNA, complete cds.
FJ596175.1:1339-1362
TGAAGGAATTACAATGGAGAATGTAAATTT1339GGTAGGGGAAAATGGAACTTCAAAGGCTATTTGCAAAAATGTCCAATTCAGTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTGAAGTTCCATTTTCCCCTACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGAAGTTCCATTTTCCCCTACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.472 | 0.463 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGAAGTTCCATTTTCCCCTACC&k=0&no_gap=0&offset=0&limit=50
2.874 | 2.402 | search_minus_done; http://172.18.8.135:50400/match?q=GGTAGGGGAAAATGGAACTTCAAA&k=0&no_gap=0&offset=0&limit=47
2.890 | 0.016 | cgi_end;

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