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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:02:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Parambassis ranga genome assembly, chromosome: 2.
LR131970.1:34703665-34703684
GGCTCCGTCTGGCCCCTGAACCCTGGCTTT34703665TTTGACCCTCAACCTGATCCTTGGGTCTAGGGTAGAGGTTGGTGGTAGGC
Trifolium pratense DNA, clone:RCG01148.
DE246774.1:47-66
TCCAACTGGCTTCAAACTATGCTTTCCAAT47TTTGACCCTCAACCTGATCCAACCGTTTCATCTTCTTCCGATAATGACCT
PV_ABb210I15.F PV_ABb Panicum virgatum genomic 5', genomic survey sequence.
JM934312.1:129-148
TAAAGATTTTGAAGATTCTTAGAAGACTGA129TTTGACCCTCAACCTGATCCTGTGATTCAATCTAAGACTCGGGGGCTACT
Alentia gelatinosa genome assembly, chromosome: 5.
OX465583.1:43346600-43346619
GGACGAAGCTCAATGTGGCCAAGGTCGCGG43346600GGATCAGGTTGAGGGTCAAACTGCCCCCTATCGGCAAAAAGGTGAAGCCT
Pilophorus perplexus genome assembly, chromosome: X.
OY037007.1:67012216-67012235
TGTATAGGGTAGCATATAATGTAGTCAACA67012216GGATCAGGTTGAGGGTCAAACGAAAAATTCCACTCCTTCGCCGAGCTTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTGACCCTCAACCTGATCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGACCCTCAACCTGATCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.240 | 0.231 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGACCCTCAACCTGATCC&k=0&no_gap=0&offset=0&limit=50
0.314 | 0.074 | search_minus_done; http://172.18.8.135:50400/match?q=GGATCAGGTTGAGGGTCAAA&k=0&no_gap=0&offset=0&limit=47
0.316 | 0.002 | cgi_end;

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