GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:43:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS16037A05 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072875.1:140-159
AGTATACTATTTATAAAAAATATAGGTCAC140TTTGAGACCCGTGCACATAATCTTGGCTAAAAGAGTATTTATTCCGAATG
KS16045B07 KS16 Capsicum annuum cDNA, mRNA sequence.
GD073644.1:677-696
AGTATACTATTTATAAAAAATATAGGTCAC677TTTGAGACCCGTGCACATAAT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:255980689-255980708
AGTATACTATTTATAAAAAATATAGGTCAC255980689TTTGAGACCCGTGCACATAATCTTGGCTAAAAGAGTATTTATTCCGAATG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:255928974-255928993
AGTATACTATTTATAAAAAATATAGGTCAC255928974TTTGAGACCCGTGCACATAATCTTGGCTAAAAGAGTATTTATTCCGAATG
TSA: Capsicum annuum MGMT_Contig12349, mRNA sequence.
JW062593.1:522-541
CATTCGGAATAAATACTCTTTTAGCCAAGA522TTATGTGCACGGGTCTCAAAGTGACCTATATTTTTTATAAATAGTATACT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTGAGACCCGTGCACATAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGAGACCCGTGCACATAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.248 | 0.239 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGAGACCCGTGCACATAA&k=0&no_gap=0&offset=0&limit=50
0.297 | 0.049 | search_minus_done; http://172.18.8.135:50400/match?q=TTATGTGCACGGGTCTCAAA&k=0&no_gap=0&offset=0&limit=46
0.298 | 0.001 | cgi_end;

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