GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 14:27:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Anas platyrhynchos genome assembly, chromosome: 2.
LS423612.1:108750625-108750643
GGCTTGGATCATAGTTCATTCCATATGGCT108750625TTTGAGGAATGTAAGAAGCATAAGGATGCATAAGGTATTCTTCTGGTTC
Anas acuta genome assembly, chromosome: 2.
OZ009963.1:111356330-111356348
GGCTTGGATCATAGTTCATTCCATATGGCT111356330TTTGAGGAATGTAAGAAGCATAAGGATGCATAAGGTATTCTTCTGGTTC
CV03094A2A03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03094A2A03.f1 5, mRNA sequence.
DV154191.1:642-660
GCTCCAAAGGGTGTTAACCATGAAAATTTC642TTTGAGGAATGTAAGAAGCCTGCTTGTTATTTTGTAGTGAAGGATTATG
Citrus reshni microsatellite DNA, locus mCrCIR03C08.
FR677576.1:292-310
AGAGAGAGAGAGAGAGAAAAGTTAGCTTCC292TTTGAGGAATGTAAGAAGCATGTAATGTAGTGGACTAGTGAACTGTTTG
Cordilura impudica genome assembly, chromosome: 3.
OY821519.1:147642545-147642563
ACATAATGTATATGGTCATTGAATTTCAAT147642545TTTGAGGAATGTAAGAAGCTTTTCGTTTTCTTGTGAAATAAATTGCCTT
Sciurus vulgaris genome assembly, chromosome: 4.
LR738614.1:49699130-49699148
GATGTCATAGACCCCAAGAGAAGTGACTGT49699130GCTTCTTACATTCCTCAAAAAATTGCAGAGAGCTGTTGTGTACCAGGGG
Acomys russatus genome assembly, chromosome: 18.
LR877229.1:27399887-27399905
AGTCATGTTGGTGAGATTTCATGAACGTTA27399887GCTTCTTACATTCCTCAAAGACAATCTCACAGCAAATGTCTCATTCTAC
Uncultured Flavobacteriia bacterium.
FO117589.1:12750-12768
GCATTACGGGGTATTTGGTCTTTTTGGCCA12750GCTTCTTACATTCCTCAAAGCTTTCAATAACTCCTTCAGAACCTGGAAT
Uncultured bacterium clone VISS18_091 genomic sequence, sequence.
KX158542.1:12750-12768
GCATTACGGGGTATTTGGTCTTTTTGGCCA12750GCTTCTTACATTCCTCAAAGCTTTCAATAACTCCTTCAGAACCTGGAAT
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:23687936-23687954
CAAACAGTTCACTAGTCCACTACATTACAT23687936GCTTCTTACATTCCTCAAAAGAAGCTAACTTTTCTCTCTCTCTCTCTCT
Rhaphigaster nebulosa genome assembly, chromosome: 5.
OX411311.1:104232291-104232309
ATATTTTTCAATTCTGTTACTTAAATCTTT104232291GCTTCTTACATTCCTCAAAGCTGGTAATCTTAGATATTAATTCAATGCA
Pogonocherus hispidulus genome assembly, chromosome: 1.
OZ004692.1:28877172-28877190
AACTCGTTAAATCAACATGATTGTCTACTA28877172GCTTCTTACATTCCTCAAAAATTTGCAGAGTTCCTTCAGCAGCCATACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTGAGGAATGTAAGAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGAGGAATGTAAGAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGAGGAATGTAAGAAGC&k=0&no_gap=0&offset=0&limit=50
0.190 | 0.032 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTCTTACATTCCTCAAA&k=0&no_gap=0&offset=0&limit=45
0.195 | 0.005 | cgi_end;

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