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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:03:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 15.
LR738605.1:25814757-25814775
GGATTCTATGCCAAAGGGCAATGGCAAGCT25814757TTTGGAGGAGAGAGAGTGGGGCAGACCTGGGTTTTCAAAAGGTAGCTGA
Arvicola amphibius genome assembly, chromosome: 1.
LR862380.1:63958181-63958199
AATGTTTTTTAAAGCATGGGAAGAGATGGT63958181TTTGGAGGAGAGAGAGTGGACTGAGGGCTACCTCACAACACCCGTCCTC
Acomys kempi genome assembly, chromosome: 6.
OU015360.1:106470662-106470680
GAGATGTTTTGTTCTGTTCTGGCTTGGGGT106470662TTTGGAGGAGAGAGAGTGGAATAATTTATTTTATCTGTCTGTAAACAAC
Apodemus sylvaticus genome assembly, chromosome: 21.
OX359318.1:24531651-24531669
GTGCCACACCACAATTAGAGGAAAATTAGA24531651TTTGGAGGAGAGAGAGTGGGGGCAGAAAGAGTTAGAGAAAGAAACAGAA
Sus scrofa scrofa breed NS chromosome 12.
CP071563.1:21491621-21491639
AAAACTAACACATAGATCCAATGGATGCTG21491621TTTGGAGGAGAGAGAGTGGGGGTGGGGGTCCCTTAGCAGCCTGGTGCCT
Pipistrellus pygmaeus genome assembly, chromosome: 6.
OX465308.1:14351487-14351505
AGGGGCCTGAGAAGGCAGGCAGCTGTGTCA14351487TTTGGAGGAGAGAGAGTGGCTCCAGGGTCAAATGGACCCGGGGATTCAA
Delphinus delphis genome assembly, chromosome: 10.
OX465336.1:1141971-1141989
GGAATGACAAATTAGGAGGATTAGCAGGAG1141971TTTGGAGGAGAGAGAGTGGTAGCCTGGACTAGGGCTGGGGGAGTGGGGA
Stenella coeruleoalba genome assembly, chromosome: 10.
OX596395.1:26945639-26945657
GGAATGACAAATTAGGAGGATTAGCAGGAG26945639TTTGGAGGAGAGAGAGTGGTAGCCTGGACTAGGGCTGGGGGAGTGGGGA
Sus scrofa genome assembly, chromosome: 12.
OY997219.1:21101578-21101596
AAAACTAACACATAGATCCAATGGATGCTG21101578TTTGGAGGAGAGAGAGTGGGGGTGGGGGTCCCTTTAGCAGCCTGGTGCC
Vespertilio murinus genome assembly, chromosome: 15.
OZ004719.1:28997758-28997776
AAGGGAGGAAGGATGAAGAGAGAGAGAGTA28997758TTTGGAGGAGAGAGAGTGGAGCTTAGCCATTCAAGAATTCTGTCCTAGT
Vipera ursinii genome assembly, chromosome: 3.
OX365966.1:19431024-19431042
GGGAAACGCTGTTTTAGAGGAAGGGACGTG19431024TTTGGAGGAGAGAGAGTGGGAAGGAGTCCGACTTAGCTTTGGGAGACAG
Vipera ursinii genome assembly, chromosome: 3.
OX365966.1:19431228-19431246
GGGAAACGCTGTTTTAGAGGAAGGGACGTG19431228TTTGGAGGAGAGAGAGTGGGAAGGAGTCCGACTTAGCTTTGGGAGACAG
Vipera ursinii genome assembly, chromosome: 3.
OX365966.1:19431432-19431450
GGGAAACGCTGTTTTAGAGGAAGGGACGTG19431432TTTGGAGGAGAGAGAGTGGGAAGGAGTCCGACTTAGCTTTGGGAGACAG
Symphodus melops genome assembly, chromosome: 2.
OX393526.1:27911031-27911049
GATTGGATATTTGAATGGAGACATGACGTG27911031TTTGGAGGAGAGAGAGTGGGTGACAACATGCAGCAAAGGGCTGCCATAG
Symphodus melops genome assembly, chromosome: 7.
OX393531.1:8664249-8664267
GACAGGACAGTTGAAGAGAGACAGGAAGTG8664249TTTGGAGGAGAGAGAGTGGGGGAGTTACATGCAGCAAATGGTTAAGATC
Labrus mixtus genome assembly, chromosome: 3.
OY757286.1:28033430-28033448
GACAGTAAAGCTGAAGAGAGACAGGAAACA28033430TTTGGAGGAGAGAGAGTGGGGGATGACATGGAGCAAAGGGCCGAGGTCG
Labrus mixtus genome assembly, chromosome: 6.
OY757289.1:6544780-6544798
GATAGAACAGCTGAAGAGAAACAATAGATG6544780TTTGGAGGAGAGAGAGTGGGGTGACATGCACTAAAGGGCCCAGGTTGGA
Labrus mixtus genome assembly, chromosome: 17.
OY757300.1:22537560-22537578
AGTCAAACAGGATACACATCCTCTCGTCCT22537560TTTGGAGGAGAGAGAGTGGAAAACGAAGAGTGACTGAAAGCACAAAAAA
Labrus bergylta genome assembly, chromosome: 18.
OZ005726.1:20004385-20004403
GATAGAGTGGCTGAAGAGAGACAGGAAATG20004385TTTGGAGGAGAGAGAGTGGGGCAAAGGACTGAAGTGGTATTCGAACCCA
Labrus bergylta genome assembly, chromosome: 21.
OZ005729.1:720132-720150
GGAGAGGACGGCTGCAGAGAGTTTGGAGAA720132TTTGGAGGAGAGAGAGTGGTACAATCACTTCTATCTGAACCACTTCTCT
TSA: Mesembryanthemum crystallinum mRNA, contig: Mcr014370.002.
FX921436.1:1931-1949
GGCGTTGAGGGGTTTGAGGGCGAGGAGGGG1931TTTGGAGGAGAGAGAGTGGGAGGGGGTGAAGGGAGAGTGGGAGTGAGAG
CMCMBb0020M23r CMCMBb Chinese Chestnut BAC Library (HindIII) Castanea mollissima genomic, genomic survey sequence.
JY178669.1:32-50
GAAGCTCTAGCCATGGAAGTCGTCGTTTTT32TTTGGAGGAGAGAGAGTGGAGGAAAGAGAGGGTGGTTAGGATTTGATTG
31-L105832-1033-036-N08-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-036-N08 3', genomic survey sequence.
JY301425.1:276-294
GACGATGATCAGGATGAGTAGATTAGAGAG276TTTGGAGGAGAGAGAGTGGGAGTGAGACATATTACTTGGTGTGAGGTAG
28-L109983-1033-179-H07-ccrv IGS-SCF-1033 Bvu-KWS2320 fosmid genomic library Beta vulgaris subsp. vulgaris genomic clone IGS-SCF-1033-179-H07 3', genomic survey sequence.
JY393840.1:388-406
ATTTGCTAATCTTCACAGTAGATTCGAGAG388TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGTAGTTGGTGTGAGGTAG
Jasminum sambac cultivar Hutoumoli linkage group Lg3.
CP073646.1:9596524-9596542
CGCATTTGCCGCGGCGGCCATTGTGTGGCT9596524TTTGGAGGAGAGAGAGTGGCGAGTTTGGCGGAAGGAGGACACCGCCATG
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:62719801-62719819
GACGACGATGCTAAGCGGTGGCTATGGAGG62719801TTTGGAGGAGAGAGAGTGGTGCGAGAGAAAGCAAAGATGTAGAGAAGAT
Avena insularis genome assembly, chromosome: 1C.
OU342338.1:449624181-449624199
TCTCCGTGGATTGAGGGCTCACCGACAAAT449624181TTTGGAGGAGAGAGAGTGGTGGGGTTCTGTGATGGACAGTGGCGGTCCG
Avena sativa genome assembly, chromosome: 1A.
OU342378.1:496913995-496914013
TCTCCGTGGATTGAGGGCTCACCGACAAAT496913995TTTGGAGGAGAGAGAGTGGTGGGGTTCTGTGATGGACAGTGGCGGTCCG
Avena sativa genome assembly, chromosome: 1.
OV702279.1:507291583-507291601
TCTCCGTGGATTGAGGGCTCACCGACAAAT507291583TTTGGAGGAGAGAGAGTGGTGGGGTTCTGTGATGGACAGTGGCGGTCCG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392548.1:9481682-9481700
TTTTGCTAATCTTCACAGTAGATTCGAGAG9481682TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392549.1:6838607-6838625
GATAGAAGTTAGTGGAGTATTACTTTTTTA6838607TTTGGAGGAGAGAGAGTGGTAGCCATGCTTGAAAAGTAGAAAGATAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:61638691-61638709
TTTTGCTAATCTTCACAGTAGATTCGAGAG61638691TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392553.1:54678686-54678704
GACGATGATCAGGATGAGTAGATTAGAGAG54678686TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:3118012-3118030
TTTTGCTAATCTTCACAGTAGATTCGAGAG3118012TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392554.1:45493571-45493589
TTTTGCTAATCTTCATAGTAGATTTGAGAG45493571TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392557.1:9562895-9562913
TTTTGCTAATCTTCACAGTAGATTCGAGAG9562895TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392558.1:6775609-6775627
GATAGAAGTTAGTGGAGTATTACTTTTTTA6775609TTTGGAGGAGAGAGAGTGGTAGCCATGCTTGAAAAGTAGAAAGATAAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392558.1:13167327-13167345
TTTTGCTAATCTTCACAGTAGATTCGAGAG13167327TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:62629321-62629339
TTTTGCTAATCTTCACAGTAGATTCGAGAG62629321TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 7.
OX392562.1:51182543-51182561
GACGATGATCAGGATGAGTAGATTAGAGAG51182543TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 8.
OX392563.1:3023564-3023582
TTTTGCTAATCTTCACAGTAGATTCGAGAG3023564TTTGGAGGAGAGAGAGTGGGAGTGAGACATAGCAGTTGGTGTGAGGTAA
Chenopodium album genome assembly, chromosome: 3.
OX419210.1:69963139-69963157
GCGGAGAATGAGGACTTTTTGGAGAAGGGT69963139TTTGGAGGAGAGAGAGTGGAGGAAGAGAGAGAAAGAGTGGAGAGAGCAG
Chenopodium album genome assembly, chromosome: 8.
OX419215.1:929524-929542
GATGGTGATCAGGATGAGTGGATTCTAGGG929524TTTGGAGGAGAGAGAGTGGGAGTGAGACATGGCAGTTCTCTACTCCCGC
Chenopodium album genome assembly, chromosome: 16.
OX419223.1:1009103-1009121
GATGGTGGTCAGGATGAGTGGATTCTAGGG1009103TTTGGAGGAGAGAGAGTGGGAGTGAGACATGGCAGTTCTCTACTCCCGC
Chenopodium album genome assembly, chromosome: 24.
OX419231.1:38645989-38646007
TTGCAGGCTGCTTCCTGGTCTTAGGAGGGG38645989TTTGGAGGAGAGAGAGTGGAAGGAGAAAGAAATAGTGAAGGAGATAGAA
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:231089028-231089046
AAGAGTTTGTTTAGAGAGAGAGAGAGACTG231089028TTTGGAGGAGAGAGAGTGGTTTTGAGAAAGAGAAAGGGGATTTAACTAA
Ilex aquifolium genome assembly, chromosome: 10.
OX637400.1:5949366-5949384
CGTGGCGACATGGGTGAGGATTGAGGTGGT5949366TTTGGAGGAGAGAGAGTGGGGTAATGATCGGAGAGAGATGGAAATGGTG
Parietaria judaica genome assembly, chromosome: 3.
OX940862.1:11108511-11108529
AGTCAGTGTCGCGGCGTTGAAGAGCCGGGT11108511TTTGGAGGAGAGAGAGTGGCTTTGCGCGATCCCTATTGTAGGGATGGGC
Urtica urens genome assembly, chromosome: 2.
OY282521.1:16281705-16281723
AAGGCGATTGGCATTGGAGGCTGACGGAGT16281705TTTGGAGGAGAGAGAGTGGAAGAGAAGAGTGGATGAGGAAGATAGAGTC
Spergularia bocconei genome assembly, chromosome: 5.
OY734946.1:1852440-1852458
AAGTTGTTGCGTGAAGAGGAAGGAAGGGGT1852440TTTGGAGGAGAGAGAGTGGCAGTGCGGAGGAAGGAGAGTGTGGTTGTGG
Spergularia bocconei genome assembly, chromosome: 16.
OY734957.1:342672-342690
GGCGGTGACCAGGGTGAGTTGACTCGAGGG342672TTTGGAGGAGAGAGAGTGGTAGCGATACGTAGCAGTTATCCACCCCCGC
Draba incana genome assembly, chromosome: 4.
OY755205.1:2035400-2035418
CGCAGCTTCTCTCTCTCTCTAGTATCTTCG2035400TTTGGAGGAGAGAGAGTGGCGTGGGGGTCCACGTGATCTTAAGACAATT
Spergularia marina genome assembly, chromosome: 11.
OY804554.1:487984-488002
GGCGGTGACCAGGGTGAGTTGACTCAAGGG487984TTTGGAGGAGAGAGAGTGGTAGTGATACGTAGCAGTTCTCCACCCCCGC
Spergularia marina genome assembly, chromosome: 17.
OY804560.1:352621-352639
GGCGGTGACCAGGGTGAGTTGACTCGAGGG352621TTTGGAGGAGAGAGAGTGGTAGCGATACGTAGCAGTTATCCACCCCCGC
Primula veris genome assembly, chromosome: 3.
OY821742.1:5068576-5068594
GAGAGAGATATAGAGAGAGAGAAAGAGAGA5068576TTTGGAGGAGAGAGAGTGGGAGGTTTGAATGTCATAGGAAGAGCTCCAA
Primula veris genome assembly, chromosome: 3.
OY821742.1:5154363-5154381
GAGAGAGATATAGAGAGAGAGAAAGAGAGA5154363TTTGGAGGAGAGAGAGTGGGAGGATAAGAGAGTGATTTCTCTGGTTTTC
Primula veris genome assembly, chromosome: 5.
OY821744.1:28978719-28978737
GATTGTTGTGGTTTTATAAGGCATTTGGGG28978719TTTGGAGGAGAGAGAGTGGTGTGAGGATGAGTGAGAGAGAGATTCATGG
Primula veris genome assembly, chromosome: 5.
OY821744.1:29018084-29018102
GATTGTTGTGGTTTTATAAGGCATTTGGGG29018084TTTGGAGGAGAGAGAGTGGTGTGCGGATGAGTGAGAGAGAGATTCATGG
Primula veris genome assembly, chromosome: 5.
OY821744.1:29057496-29057514
GATTGTTGTGGTTTTATAAGGCATTTGGGG29057496TTTGGAGGAGAGAGAGTGGTGTGAGGATGAGTGAGAGAGAGATTCATGG
Primula veris genome assembly, chromosome: 7.
OY821746.1:10101449-10101467
TTTGTGCAGAATGCAAAATGGGAAGTGGGT10101449TTTGGAGGAGAGAGAGTGGGAGGGAGGAAGTTGCTTAAAGATCGCAGTT
Primula vulgaris genome assembly, chromosome: 3.
OY987214.1:4754378-4754396
GAGAGAGATATATAGAGAGAGAAAGAGAGA4754378TTTGGAGGAGAGAGAGTGGGAGGTTTGAATGTCATAGGAAGAGCTCCAA
Primula vulgaris genome assembly, chromosome: 3.
OY987214.1:4833827-4833845
GAGAGAGATATATAGAGAGAGAAAGAGAGA4833827TTTGGAGGAGAGAGAGTGGGAGGTTTGAATGTCATAGGAAGAGCTCCAA
Caenorhabditis briggsae isolate QX1410_ONT chromosome I.
CP090891.1:12387218-12387236
TTTAGAACTCGAGATATGGCCCTTTGAAGT12387218TTTGGAGGAGAGAGAGTGGGGAAACTGGGGAGAGCGCAGACGACGAGAC
Caenorhabditis briggsae isolate VX34 chromosome I.
CP092620.1:12194009-12194027
TTTAGAACTCGAGATACGGCCCTTTGAAGT12194009TTTGGAGGAGAGAGAGTGGGGAAACTGGGGAGAGCGCAGACGACGAGAC
Caenorhabditis briggsae strain AF16 chromosome I.
CP120830.1:12149378-12149396
TTTAGAACTCGAGATATGGCCCTTTGAAGT12149378TTTGGAGGAGAGAGAGTGGGGAAACTGGGGAGAGCGCAGACGACGAGAC
Notocelia uddmanniana genome assembly, chromosome: 17.
LR991069.1:14411071-14411089
TTGAAATCAGAACTACTACATTATCAGGAA14411071TTTGGAGGAGAGAGAGTGGAATTTACAGATAATGAAATGAAATTATTAA
2_Tsi_b3v08.
OC214747.1:145-163
TCAGGGATTGAGAGTCAGGACCAGTGTTTG145TTTGGAGGAGAGAGAGTGGCGTGGTGGTCAGGGATTGAGAGTCAGGGTC
2_Tsi_b3v08.
OC214747.1:259-277
TCAGGGATTGAGAGCCAGGGTCAGTGTTTG259TTTGGAGGAGAGAGAGTGGCGTGGTGGTCAGGGATTGAGAGTCAGGGTC
Rhynchopus euleeides genome assembly, chromosome: 13.
OY723249.1:1029715-1029733
CAAAAAAGGGTGGGAAACGGGATGTGCCAC1029715TTTGGAGGAGAGAGAGTGGGTGAAATGCGAAGAAATCTTGCAGGGAAGC
Pyrrhosoma nymphula genome assembly, chromosome: 4.
OY754330.1:60037005-60037023
AGCATTGAGAGGAATAGAAAAATCAAGAGC60037005TTTGGAGGAGAGAGAGTGGACTTTGATTCTTGGAGGATCAGCTTCAGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTGGAGGAGAGAGAGTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGGAGGAGAGAGAGTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.385 | 0.376 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGGAGGAGAGAGAGTGG&k=0&no_gap=0&offset=0&limit=50
0.507 | 0.122 | search_minus_done; http://172.18.8.135:50400/match?q=CCACTCTCTCTCCTCCAAA&k=0&no_gap=0&offset=0&limit=0
0.507 | 0.000 | cgi_end;

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