GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 22:42:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Quercus dentata isolate Qdleaves-2020 chromosome 10.
CP116453.1:17718501-17718521
TCAGTGAAAAATATTTTTAGAAAAAATCAT17718501TTTGGCTTGTAATTTTCAGCATTTAATGCAACAAAAAATCTTGATTAATCA
Quercus dentata isolate Qdleaves-2020 chromosome 10.
CP116453.1:18135853-18135873
TCGGTGAAAAATATTTTCAGAAAAAATCAT18135853TTTGGCTTGTAATTTTCAGCATTTAATGCAACAAAAAAATCTTGATCAATC
Quercus robur genome assembly, chromosome: 10.
OW028774.1:41120185-41120205
TGATTGATCAAGATTTTTTGTTGCATTAAA41120185TGCTGAAAATTACAAGCCAAAATGATTTTTTCTGAAAATATTTTTCACTGA
Thumatha senex genome assembly, chromosome: 22.
OX419746.1:3624809-3624829
GTCAGGTCAGACGTCAGTAGCACCCAACAA3624809TGCTGAAAATTACAAGCCAAAGAATAGTTGCTTTTATCAGCCAGAAATCCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTGGCTTGTAATTTTCAGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGGCTTGTAATTTTCAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGGCTTGTAATTTTCAGCA&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTGAAAATTACAAGCCAAA&k=0&no_gap=0&offset=0&limit=48
0.138 | 0.001 | cgi_end;

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