GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 11:17:59, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Muntiacus reevesi genome assembly, chromosome: X.
OZ005628.1:35588287-35588306
TGTTTGTTTTTTGTTAACTGTATTTATTTA35588287TTTGTATTGGTTGTGCTGGGTCTTTGTTGCTGCATGTGAGCCTTTTCTGG
Trifolium pratense DNA, clone:RC0350r.ab1.
DE245237.1:416-435
AAATAGAAAAGAATTTTGTTGCTATTATTT416TTTGTATTGGTTGTGCTGGGTAATTTTTTATTGTTCAGATTCTAACAAAA
Thysanoteuthis rhombus genome assembly, chromosome: 9.
OY735206.1:54776220-54776239
GTTTCGTGTGGAATTCTTCCAGCTTTATTG54776220TTTGTATTGGTTGTGCTGGGGGGAGATTCTTTGGGTGTGTTACTTTCTTC
Bos mutus isolate yakQH1 chromosome X.
CP027098.1:105727812-105727831
CCAGAAAAAGCTTACATGTAGCAGCGAAGA105727812CCCAGCACAACCAATACAAATAAAGTTATCAAAAAACAAACAAAAGAGTA
Bos gaurus x Bos taurus genome assembly, chromosome: X.
OX258984.1:116989580-116989599
CCAGAAAAAGCTTACATGTAGCAGCGAAGA116989580CCCAGCACAACCAATACAAATAAAGTTATCAAAAAACAAACAAAAGAGTA
Bos taurus strain mammals genome assembly, chromosome: X.
OX344689.1:134362042-134362061
CCAGAAAAAGCTTACATGTAGCAGCGAAGA134362042CCCAGCACAACCAATACAAATAAAGTTATCAAAAAACAAACAAAAGAGTA
Bos taurus genome assembly, chromosome: BtaX.
OY997258.1:124698102-124698121
CCAGAAAAAGCTTACATGTAGCAGCGAAGA124698102CCCAGCACAACCAATACAAATAAAGTTATCAAAAAACAAACAAAAGAGTA
Trifolium pratense cDNA clone:RCE14107.
BB914530.1:100-119
TTTGGTTAGAATCTGAAAAATAAAAAATTA100CCCAGCACAACCAATACAAAAAATAATAGCAACAAATTTTTTTTCTAAGT
Trifolium pratense cDNA clone:RCE34306.
BB925488.1:102-121
TTTGGTTAGAATCTGAACAATAAAAAATTA102CCCAGCACAACCAATACAAATTTTTTTTCTAAGTTTTACTTCATTGATTA
Trifolium pratense cDNA clone:RCE38184.
BB927152.1:104-123
TTTGGTTAGAATCTGAACAATAAAAAATTA104CCCAGCACAACCAATACAAATTTTTTTTCTAAGTTTTACTTCATTGATTA
Bos taurus clone CH240-455H21, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC223881.1:78949-78968
CCAGAAAAAGCTTACATGTAGCAGCGAAGA78949CCCAGCACAACCAATACAAATAAAGTTATCAAAAAACAAACAAAAGAGTA
Thysanoteuthis rhombus genome assembly, chromosome: 21.
OY735218.1:36815403-36815422
AGGGAAGAAGGTGACACGCTCGAAACACGT36815403CCCAGCACAACCAATACAAACGACAAAACTAGAAGAATTTCGCACAAAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTGTATTGGTTGTGCTGGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTGTATTGGTTGTGCTGGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.114 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=TTTGTATTGGTTGTGCTGGG&k=0&no_gap=0&offset=0&limit=50
0.163 | 0.049 | search_minus_done; http://172.18.8.135:50400/match?q=CCCAGCACAACCAATACAAA&k=0&no_gap=0&offset=0&limit=47
0.169 | 0.006 | cgi_end;

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