GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:57:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Microcaecilia unicolor genome assembly, chromosome: 14.
LR594645.1:11526744-11526763
CATCTTCTACCTTCTTACTGGAAAGATTTT11526744TTTTCCAATCTTCACCCACCAAACAAGTAAGCAGATGGCCCTCAAGCAAT
Microcaecilia unicolor genome assembly, chromosome: 14.
LR594645.1:11852351-11852370
ATCTTCTACCTTCTTACTGGAAAGATTTTT11852351TTTTCCAATCTTCACCCACCAAACAAGTAAGCAGATGGCCCTCAAGCAAC
Dianthus caryophyllus mRNA, clone: CES04I05, 5' end sequence.
FY383798.1:41-60
TCTTTTCTCCCCTCTATTTTTATATCATTA41TTTTCCAATCTTCACCCACCAAAATCATAATCATCATAATCATAATTTAT
Ferdinandea cuprea genome assembly, chromosome: 1.
OY754958.1:109206933-109206952
TACTGACATGATCCCGCTAATGTTCTCTAA109206933TTTTCCAATCTTCACCCACCAGGAAGCAAGTCATTTAATTTGTTTCTTTC
Luidia sarsii genome assembly, chromosome: 2.
OX465102.1:13561366-13561385
CCGACACCTTGTGCACAAACCCTATGGGGT13561366GGTGGGTGAAGATTGGAAAAGATTTCTGCTTTGGATAATTATCCTGTTAT
Clivina fossor genome assembly, chromosome: 12.
OZ014562.1:13990022-13990041
GATTAAAAGGGTTGGAGTACGAAATAAATT13990022GGTGGGTGAAGATTGGAAAATTGATAAAAATATTGTTAGTGTTAGTTAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTCCAATCTTCACCCACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCCAATCTTCACCCACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.182 | 0.173 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCCAATCTTCACCCACC&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGGGTGAAGATTGGAAAA&k=0&no_gap=0&offset=0&limit=46
0.199 | 0.001 | cgi_end;

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