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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:14:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Potentilla anserina genome assembly, chromosome: 6.
OW176986.1:33442632-33442651
GCTTCCTACTCCCATCTCTGTAGACCTGTT33442632TTTTCCCAAAGCTAGACCAGCTGCCCTGGCTAGTTCTCGACTGTTTATTC
Eupeodes latifasciatus genome assembly, chromosome: 3.
OV049926.1:131637391-131637410
AATTGTGATCTCTTCTTCTAAGGCTAACTT131637391TTTTCCCAAAGCTAGACCAGCTATGCTCACGCCATTTGGTCGTTCTCGTA
Eupeodes corollae genome assembly, chromosome: 2.
OX244024.1:106615130-106615149
AATCGTGATCTCTTCTTCCAAGGCTAACTT106615130TTTTCCCAAAGCTAGACCAGCTATGCTCACGCCATTTGGTCGTTCTCGTA
TSA: Cannabis sativa PK02506.2_1.CasaPuKu mRNA sequence.
JP449763.1:843-862
GGGTGCCCAATTTGTATGGTTTGAAGAATC843CTGGTCTAGCTTTGGGAAAATGGGTACCTCATTTGTATGTAAATAACAGT
TSA: Cannabis sativa PK02506.1_1.CasaPuKu mRNA sequence.
JP472935.1:2449-2468
GGGTGCCCAATTTGTATGGTTTGAAGAATC2449CTGGTCTAGCTTTGGGAAAATGGGTACCTCATTTGTATGTAAATAACAGT
Epistrophe grossulariae genome assembly, chromosome: 3.
OV839568.1:116884966-116884985
TACGCGAACGACCAAATGGTGTGAGTATAG116884966CTGGTCTAGCTTTGGGAAAAAGGCTAGCCCTAGAGGAAGAGATTACAATT
Epistrophe eligans genome assembly, chromosome: 2.
OX596029.1:28636953-28636972
TACGAGAACGACCAAATGGTGTGAGTATAG28636953CTGGTCTAGCTTTGGGAAAAAAGCTAGCCCTAGAAGAAGAGATTACAATT
Eupeodes luniger genome assembly, chromosome: 2.
OX608074.1:44144326-44144345
TACGAGAACGACCAAATGGCGTGAGCATAG44144326CTGGTCTAGCTTTGGGAAAAAAGTTAGCCTTAGAAGAAGAGATCACAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTCCCAAAGCTAGACCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCCCAAAGCTAGACCAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.216 | 0.207 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCCCAAAGCTAGACCAG&k=0&no_gap=0&offset=0&limit=50
0.314 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=CTGGTCTAGCTTTGGGAAAA&k=0&no_gap=0&offset=0&limit=47
0.318 | 0.004 | cgi_end;

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