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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 15:59:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Anas acuta genome assembly, chromosome: 9.
OZ009972.1:20985895-20985914
GCAAGGTCAACAGACTCTAATCCAAGGATT20985895TTTTCCCCTTTGTTTCATGCGCTGTATTTTGTTTTCTACTATATTAAGCC
so80d11.y1 Gm-c1040 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1040-1966 5', mRNA sequence.
BE330577.1:57-76
TACGACGTCGTTTTTTTTTCACCTTCCGTT57TTTTCCCCTTTGTTTCATGCCATTCGCAACGGTTAAAGAGCGAGAGTGAC
sal21e07.y1 Gm-c1059 Glycine soja cDNA clone SOYBEAN CLONE ID: Gm-c1059-2894 5' similar to TR:Q9SG69 Q9SG69 PUTATIVE RING ZINC FINGER PROTEIN, mRNA sequence.
BM525244.1:39-58
TACGACGTCGTTTTTTTTTCACCTTCCGTT39TTTTCCCCTTTGTTTCATGCCATTCGCAACGGTTAAAGAGCGAGAGTGAC
CCCC5125.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC5125 5', mRNA sequence.
GR831250.1:50-69
TACGACGTCGTTTTTTTTTCACCTTCCGTT50TTTTCCCCTTTGTTTCATGCCATTCGCAACGGTTAAAGAGCGAGAGTGAC
CCCC9135.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC9135 5', mRNA sequence.
GR837587.1:121-140
TACGACGTCGTTTTTTTTTCACCTTCCGTT121TTTTCCCCTTTGTTTCATGCCATTCGCAACGGTTAAAGAGCGAGAGTGAC
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:11060575-11060594
TACGACGTCGTTTTTTTTTCACCTTCCGTT11060575TTTTCCCCTTTGTTTCATGCCATTCGCAACGGTTAAAGAGCGAGAGTGAC
Rhododendron vialii isolate Sample 1 chromosome 1b.
CP127052.1:42320972-42320991
AAACTAGACGAATTCTACTGGCCAGATCAT42320972TTTTCCCCTTTGTTTCATGCCTTGTGTAAGACTGATGTTATCATTCTTTA
Rhododendron vialii isolate Sample 1 chromosome 1a.
CP127065.1:46081933-46081952
AAACTAGACGAATTCTACTGGCCAGATCAT46081933TTTTCCCCTTTGTTTCATGCCTTGTGTAAGACTGATGGTATCATTCTTTA
Leishmania tarentolae isolate M2 chromosome 35.
CP119859.1:316886-316905
CCCTCACATCGCCACCTTCTCTGTACCCGT316886TTTTCCCCTTTGTTTCATGCAATCAAACCATACCTCCCCTTCATGATGCA
Nomophila noctuella genome assembly, chromosome: 8.
OY292489.1:12879302-12879321
ACCATTGACTTGCCATGGCGTAGGCAGATT12879302TTTTCCCCTTTGTTTCATGCAATCTGCATCCGTTGATGTGTCATGAGTGT
Apteryx australis mantelli genome assembly, scaffold: scaffold2.
LK064626.1:7418004-7418023
GGCTTAATATAGTAGAAAACAAAGTACATT7418004GCATGAAACAAAGGGGAAAAAATCCTTGAATTATAAACTGTTGACCTTGC
Cottoperca gobio genome assembly, chromosome: 4.
LR131934.1:25377283-25377302
TTGAAGTCGACTTAACAAAAACAAAGAACA25377283GCATGAAACAAAGGGGAAAAGAGTCGAAGCCGCTTAGATCTTTAATCAGC
Erpetoichthys calabaricus genome assembly, chromosome: 6.
LR536437.2:70856578-70856597
AATCAGATACAAGGTACATCAGGGAAAAAT70856578GCATGAAACAAAGGGGAAAATTTAATGGAGTCTGATTTTCAATAGATTGA
Anas platyrhynchos genome assembly, chromosome: 9.
LS423619.1:5320530-5320549
GGCTTAATATAGTAGAAAACAAAATACAGC5320530GCATGAAACAAAGGGGAAAAAATCCTTGGATTAGAGTCTGTTGACCTTGC
Taurulus bubalis genome assembly, chromosome: 2.
OU342712.1:37501696-37501715
TGTAATATTAGTTGACAAAATTGTCAACTG37501696GCATGAAACAAAGGGGAAAAATAGTACCGTCAAAAGTCCATTTGCTAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTCCCCTTTGTTTCATGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCCCCTTTGTTTCATGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.512 | 0.504 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCCCCTTTGTTTCATGC&k=0&no_gap=0&offset=0&limit=50
0.670 | 0.158 | search_minus_done; http://172.18.8.135:50400/match?q=GCATGAAACAAAGGGGAAAA&k=0&no_gap=0&offset=0&limit=40
0.673 | 0.003 | cgi_end;

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