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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-05 07:09:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Arachis hypogaea DNA, clone: 8iHA03O11, cultivar: YI-0311.
DE998522.1:36-56
TTGATGAATGATCTGATTCTGATATTATTC36TTTTCTGGAGAAGCACAAACATAAGCATCCGTGAATAAAGTGAAGTAATTT
Arachis hypogaea DNA, clone: 8iHA07G05, cultivar: YI-0311.
DE998617.1:518-538
TTGATGAATGATCTGATTCTGATATTATTC518TTTTCTGGAGAAGCACAAACATAAGCATCCGTGAATAAAGTGAAGTAATTT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:47484789-47484809
ATCCCCAGTATAGTCAAAGTAACAATGGGA47484789TTTTCTGGAGAAGCACAAACAACGAATTTATGAATGACCCAGTTCAACAAA
Leptidea sinapis genome assembly, chromosome: 22.
FR990175.1:237283-237303
ATTTCAGAACTAAAAACTTCTGCAATATTT237283TTTTCTGGAGAAGCACAAACAGCTTAAGAAGTCTATTGCACATTCTATATG
Xylophagus ater genome assembly, chromosome: 7.
OY730484.1:1749203-1749223
AGAAATAAATATAAATCATTTGGAACAAGT1749203TTTTCTGGAGAAGCACAAACAGATCTTTTTAGTTTCATATCAAAGTCAAAA
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:10798801-10798821
AAATTACTTCACTTTATTCACGGATGCTTA10798801TGTTTGTGCTTCTCCAGAAAAGAATAATATCAGAATCAGATCATTCATCAA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:7023902-7023922
AAATTACTTCACTTTATTCACGGATGCTTA7023902TGTTTGTGCTTCTCCAGAAAAGAATAATATCAGAATCAGATCATTCATCAA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:13257428-13257448
AAATTACTTCACTTTATTCACGGATGCTTA13257428TGTTTGTGCTTCTCCAGAAAAGAATAATATCAGAATCAGATCATTCATCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTCTGGAGAAGCACAAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCTGGAGAAGCACAAACA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.382 | 0.373 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCTGGAGAAGCACAAACA&k=0&no_gap=0&offset=0&limit=50
0.475 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTTGTGCTTCTCCAGAAAA&k=0&no_gap=0&offset=0&limit=45
0.477 | 0.002 | cgi_end;

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