GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:24:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EST-2262 Spartina alterniflora leaf salinity induced expressed sequence tag (EST) Sporobolus alterniflorus cDNA, mRNA sequence.
EH276961.1:3-24
AA3TTTTCTTTTCTCCGATTTCATTATCGTCAACTACATATCCAAAGGTCACATA
DQ115635 Hevea brasiliensis x Hevea benthamiana cv. FX3899 Hevea brasiliensis x Hevea benthamiana genomic clone HbCIRBAC92H03PIB PIBrev, genomic survey sequence.
DQ115635.1:410-431
AGTTCTTTAATTCTATTGTCAATTCTGAAA410TTTTCTTTTCTCCGATTTCATTTGACAGTTAGGTCAGGAGTCAGCTCTCGGG
Phosphuga atrata genome assembly, chromosome: 3.
OX155894.1:88222265-88222286
ATAATGCCCAGTGTTCCACGAGCCCTTTCT88222265TTTTCTTTTCTCCGATTTCATTAGAACTTTGTTTTGTAGTATTCTTTAAATG
Linnaemya tessellans genome assembly, chromosome: 4.
OX637535.1:391604-391625
TCCTTTCGATTTGAATTTTTTATGAAAACA391604AATGAAATCGGAGAAAAGAAAAATGTCACTAAAGAACGAGGCTAGACGATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTCTTTTCTCCGATTTCATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTCTTTTCTCCGATTTCATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.163 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTCTTTTCTCCGATTTCATT&k=0&no_gap=0&offset=0&limit=50
0.180 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=AATGAAATCGGAGAAAAGAAAA&k=0&no_gap=0&offset=0&limit=47
0.180 | 0.001 | cgi_end;

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