GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 16:21:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Mamestra brassicae genome assembly, chromosome: 14.
LR991001.1:14223967-14223986
GTTTCTATTAACCCTAGAATGAAGAATATC14223967TTTTGCACCAAAAGTTGTCGAACTTTCAAGCAAGTGTCATAGAATATTTT
Merzomyia westermanni genome assembly, chromosome: 2.
OX465289.1:35943815-35943834
TCTATTTGCATATAATACTTGAATACATAA35943815TTTTGCACCAAAAGTTGTCGAAAAAAATGTTTCTTATTCGTTTCTCTAAA
Diaperis boleti genome assembly, chromosome: 2.
OY757244.1:66708996-66709015
TGTCACCAAAAATTGTTATGAAAAATGGAG66708996TTTTGCACCAAAAGTTGTCGGCAAAAAATAAAATTTGACACCAAAAATTG
Pseudognaphalium luteoalbum genome assembly, chromosome: 2.
OY730193.1:1188924-1188943
ACAATTGATTGATATGTAAACGTGTAGTGT1188924CGACAACTTTTGGTGCAAAAGCTTTTACAAATGCATCTCGTTTACCATTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTGCACCAAAAGTTGTCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTGCACCAAAAGTTGTCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.326 | 0.317 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTGCACCAAAAGTTGTCG&k=0&no_gap=0&offset=0&limit=50
0.410 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=CGACAACTTTTGGTGCAAAA&k=0&no_gap=0&offset=0&limit=47
0.410 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).