GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:42:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Oryzias latipes strain HSOK chromosome 1.
CP020621.1:31775833-31775852
CAGATGTATTCTGTTTTAGTTTTCTTTTTT31775833TTTTTCAGTTCTTAGTGGAGCTTTGCTCCCCAAACAGCTGAATTTGCTGT
Oryzias latipes strain Hd-rR chromosome 1 sequence.
CP020665.1:31286345-31286364
AGATGAAATCTGTTTTAGTTTTCTTTTTTT31286345TTTTTCAGTTCTTAGTGGAGCTTTGCTGTCCCATGCACCACTTAGCCCCC
Oryzias latipes strain HNI chromosome 1.
CP020779.1:29354771-29354790
TGAGATGTATTCTGTTTTAGTTTTCTTTTT29354771TTTTTCAGTTCTTAGTGGAGCTTTGCTCCCTAAACAGCTGAATTTGCTGT
Dolichovespula media genome assembly, chromosome: 18.
OU426868.1:4963230-4963249
TTGTTATAATTATTAGAGAAGTAAATATAA4963230TTTTTCAGTTCTTAGTGGAGCTCACAAGGTTATTTGATAAATCAAGGTTA
Steromphala cineraria genome assembly, chromosome: 4.
OU744723.1:51463850-51463869
CGCCAATGCTTCCTGATTCCAAAAATGATT51463850TTTTTCAGTTCTTAGTGGAGCAATATCGTCTGGGAGAAGCCATAGGGTCG
Yponomeuta malinellus genome assembly, chromosome: 6.
OX371000.1:5694796-5694815
CTGTTTTTATTTTTTATATAATTTTTTTTA5694796TTTTTCAGTTCTTAGTGGAGGAGCGGGAGAAAAATAAACAAGTCCCTTAT
Yponomeuta malinellus genome assembly, chromosome: 20.
OX371014.1:300547-300566
CGGTTTTTATGTTTTATAATTTTTTTTTTA300547TTTTTCAGTTCTTAGTGGAGGAGTGGGAGAAAAATAAACAAGTCCCTTAT
Caenorhabditis imperialis genome assembly, chromosome: X.
OY751544.1:14079405-14079424
ACGGATTATGGATAGAAGTTTTTTTGGCTT14079405TTTTTCAGTTCTTAGTGGAGGGGATATATACTTTTGGCTCCGCCTTTTCA
Cervus elaphus genome assembly, chromosome: 19.
OU343096.1:75132977-75132996
AACTGCTGCAGAGCTCTCTCTGACTCTGAA75132977CTCCACTAAGAACTGAAAAATTATTGGTGACCTGGAAAATAAGCCAGAAC
Vespula vulgaris genome assembly, chromosome: 16.
FR997683.1:525811-525830
TAACCTTGATTTATCAAACAACCTTGTGAG525811CTCCACTAAGAACTGAAAAATTATATTTACTTTTCTAATATTTATAACAA
Vespula germanica genome assembly, chromosome: 18.
HG996545.1:501897-501916
TAACCTTGATTTATCAAACAACCTTGTGAG501897CTCCACTAAGAACTGAAAAATTATATTTACTTTTCTAATATTTATAACAA
Vespa crabro genome assembly, chromosome: 18.
OU342417.1:527259-527278
TAACCTTGATTTATCAAATAATCTTGTGAG527259CTCCACTAAGAACTGAAAAATTATATTTACTTCTCTAATATTTATAACAA
Dolichovespula saxonica genome assembly, chromosome: 18.
OU427010.1:601133-601152
TAACCTTGATTTATCAAATAACCTTGTGAG601133CTCCACTAAGAACTGAAAAATTATATTTACTTCTCTAATAATTATAACAA
Vespa velutina genome assembly, chromosome: 14.
OU525136.1:686555-686574
TAACCTTGATTTATCAAATAATCTTGTGAG686555CTCCACTAAGAACTGAAAAATTATATTTACTTCTCTAATATTTATAACAA
Dolichovespula sylvestris genome assembly, chromosome: 15.
OU964975.1:2203353-2203372
TAACCTTGATTTATCAAATAACCTTGTGAG2203353CTCCACTAAGAACTGAAAAATTATATTTACTTCTCTAATAATTATAACAG
Sicus ferrugineus genome assembly, chromosome: 4.
OV277352.1:24524181-24524200
TAGGCACACACACATGCCAGGTTGAGAGAA24524181CTCCACTAAGAACTGAAAAATGAGGTCTTCGCTGTAATGCAAGCTCGCCC
Yponomeuta malinellus genome assembly, chromosome: 6.
OX371000.1:6530936-6530955
CTAAGGGACTTGTTTATTTTTCTCCCGCTC6530936CTCCACTAAGAACTGAAAAATAAAAAAAATTAAATAAAAAATAAAAACCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTTCAGTTCTTAGTGGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTTCAGTTCTTAGTGGAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.152 | 0.143 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTTCAGTTCTTAGTGGAG&k=0&no_gap=0&offset=0&limit=50
0.302 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=CTCCACTAAGAACTGAAAAA&k=0&no_gap=0&offset=0&limit=42
0.308 | 0.006 | cgi_end;

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