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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:40:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus nathusii genome assembly, chromosome: 8.
OY882865.1:79002254-79002272
TTAATGAGATATTCCACATTCCTTGATATC79002254TTTTTCATCAACAAGACTGGGAACTAAGTTTTACTCATCTATGTCCAGA
Pipistrellus nathusii genome assembly, chromosome: 8.
OY883185.1:78997853-78997871
TTAATGAGATATTCCACATTCCTTGATATC78997853TTTTTCATCAACAAGACTGGGAACTAAGTTTTACTCATCTATGTCCAGA
Meleagris gallopavo genome assembly, chromosome: 3.
OW982254.1:58471058-58471076
TTTGTTAGTAAATTTGAAAACATTGCCTGT58471058TTTTTCATCAACAAGACTGTCCACAGTTCCAAAATGGTTCCCTATGGAT
Meleagris gallopavo genome assembly, chromosome: 3.
OW982293.1:58463937-58463955
TTTGTTAGTAAATTTGAAAACATTGCCTGT58463937TTTTTCATCAACAAGACTGTCCACAGTTCCAAAATGGTTCCCTATGGAT
Beauveria bassiana strain HN6 chromosome 9.
CP045878.1:1127951-1127969
TTGATACCCCCCAGATTTTTTTCTTTGCGT1127951TTTTTCATCAACAAGACTGATCATTTTTCTTTTAAAAGAGCGACAACAA
Inga oerstediana genome assembly, chromosome: 10.
OY723408.1:66139246-66139264
TCAGACAAATTTAATTCCCCTTCTCTTTGT66139246TTTTTCATCAACAAGACTGGACTTCATGGTCCATGCATGTGCAATTCCA
Citrus sinensis genome assembly, chromosome: 8.
OY754325.1:25416604-25416622
ACTTCTGGTAATTATTTTTCTTTCTTTCTT25416604TTTTTCATCAACAAGACTGAGCTAAATTTTATAGACGCCTTTACCCATC
Brevibacillus laterosporus strain 1821L chromosome, complete genome.
CP033464.1:4068614-4068632
CATATCAGTCACAGTCACACGATTTGGATA4068614TTTTTCATCAACAAGACTGTGCATTCGTACAAGTAACAAAGAATTTCCA
Kineobactrum salinum strain M2 chromosome, complete genome.
CP048711.1:3814182-3814200
GCCTCCTTTTTCTACGAAGCCAGCAGTAAG3814182TTTTTCATCAACAAGACTGATTTCGACATATCCCCTACGCTTTCCATAA
Inachis io genome assembly, chromosome: 19.
LR989914.1:5309140-5309158
TCCGAAATAGGTATTTTGAAATAACGCCTC5309140TTTTTCATCAACAAGACTGCGACCTTAGCTTGTCATGCAGAATATTCTC
Vanessa atalanta genome assembly, chromosome: 18.
LR990567.2:5141526-5141544
TCCGAAATAGGTATTTTGAAATAACGCCTC5141526TTTTTCATCAACAAGACTGCGACCTTAGCTTGTCATGCAGAATATTCTC
Vanessa cardui genome assembly, chromosome: 20.
LR999945.1:5712597-5712615
TCCGCAATAGGTATTTTGAAATAACGCCTC5712597TTTTTCATCAACAAGACTGCGACCTTAGCTTGTCATGCAGAATATTCTC
Lasiommata megera genome assembly, chromosome: 20.
OV743327.1:3908406-3908424
TCCGAAATAGGTATTTTGAAATAACGCCTC3908406TTTTTCATCAACAAGACTGCGACCTCAACTTGTCGTGAATGTTTCTCGG
Bicyclus anynana genome assembly, chromosome: 9.
OX359213.1:15043990-15044008
GGTATAAATTTATAAAGCGAGCGAATAATT15043990TTTTTCATCAACAAGACTGTTAATGAAACGTTCGCATAAATCGCAGATA
Lampropteryx suffumata genome assembly, chromosome: 19.
OX402563.1:17179053-17179071
TTAGTACTTTATCATTTTTCAAAATCATAA17179053TTTTTCATCAACAAGACTGGAAAGTCACTGGAAAGCTAAATATCGATGT
Beris chalybata genome assembly, chromosome: 3.
OX421896.1:43531101-43531119
TGAAGGTTCTTTTTCACTAATATTAGCTTC43531101TTTTTCATCAACAAGACTGGCTACAGATTCAGGTCTTGATGACGGCTTC
Beris morrisii genome assembly, chromosome: 2.
OX638311.1:66862409-66862427
TGAAGGTTCTATTTCATGAATAATTGCTTC66862409TTTTTCATCAACAAGACTGGCTACAGATTCAGGCCTTGATGATGGCTTC
Nymphalis c-album genome assembly, chromosome: 18.
OY720604.1:5223563-5223581
ACCGAAATAGGTATTTTGAAATAACGCCTC5223563TTTTTCATCAACAAGACTGCGACCTTAGCTTGTCATGCAGAATATTCTC
Alviniconcha strummeri genome assembly, chromosome: 7.
OY757547.1:16923556-16923574
AACGAAACAAATCTGTTATTTGGATATATA16923556TTTTTCATCAACAAGACTGCAGTGGGCTGATCAAACCAGATACGCAGCC
Lamellibrachia columna genome assembly, chromosome: 1.
OY759261.1:55217205-55217223
AGTGTTATAAGTGACACACGTCTTCTTGCC55217205TTTTTCATCAACAAGACTGTGGTTTATATTTTATGTTTGGCTATTTTTG
Nineta flava genome assembly, chromosome: 4.
OY986043.1:99271924-99271942
TACTTAGCATATTCTTAACTTTTTTTCATT99271924TTTTTCATCAACAAGACTGGCGACGATTTAAATTCTGAAGGTATTTGAA
Erinaceus europaeus genome assembly, chromosome: 1.
OX485810.1:137384502-137384520
CTTCCTCTCTCTCTCTCTCTCTCTCTCTCT137384502CAGTCTTGTTGATGAAAAATAAAATCAAGCCTCTTCCCTGTTCATGTAG
Electrona antarctica genome assembly, chromosome: 15.
OX578260.1:18143265-18143283
AAAATAAAGGTCCAGGGTGCAATCCCACCC18143265CAGTCTTGTTGATGAAAAACGGCATGCTATAGTATGCCGTCTGAGATGG
Citrus reticulata microsatellite DNA, locus mCrCIR01D06, allele 01D06-ca(12).
AM489734.1:228-246
GATGGGTAAAGGCGTCTATAAAATTTAGCT228CAGTCTTGTTGATGAAAAAAAGAAAGAAAGAAAAATAATTACCAGAAGT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 3.
OX392549.1:31550863-31550881
TTTTCCTCACAGGCTGATACTCCAAATCTC31550863CAGTCTTGTTGATGAAAAATCCACAACCTAAATGTACAAATCAAATTCA
Mycoplasma hyopneumoniae 7448, complete genome.
AE017244.1:496603-496621
CCGCTTTTATCGAAAAAATCCAAAATTAAT496603CAGTCTTGTTGATGAAAAATAATCTTGAACTGAATAATTTAGGTTATAA
Mycoplasma hyopneumoniae 7422, complete genome.
CP003802.1:519168-519186
CCGCTTTTATCGAAAAAATCCAAAATTAAT519168CAGTCTTGTTGATGAAAAATAATCTTGAACTGAATAATTTAGGTTATAA
Brevibacterium sp. JNUCC-42 chromosome, complete genome.
CP062262.1:1126711-1126729
TGGAAATTCTTTGTTACTTGTACGAATGCA1126711CAGTCTTGTTGATGAAAAATATCCAAATCGTGTGACTGTGACTGATATG
Pinctada fucata DNA, chromosome 3, nearly complete sequence, Principal Pseudohaplotype.
AP027104.1:47257790-47257808
ACATTGTGGCTAAATGCATACGCCGTCTTC47257790CAGTCTTGTTGATGAAAAATACCAAAGAATATCCTACTGTCTCAACGAT
Pinctada fucata DNA, chromosome 3, nearly complete sequence, Alternate Pseudohaplotype.
AP027118.1:49387577-49387595
ACATTGTGGCTAAATGCATACGCCGTCTTC49387577CAGTCTTGTTGATGAAAAATACCAAAGAATATCCTACTGTCTCAACGAT
Nymphalis polychloros genome assembly, chromosome: 18.
HG992259.1:6604456-6604474
GAGAATATTCTGCATGACAAGCTAAGGTCG6604456CAGTCTTGTTGATGAAAAAGAGGCGTTATTTCAAAATACCTATTTCGGT
Nymphalis urticae genome assembly, chromosome: 19.
LR990002.1:6228929-6228947
GAGAATATTCTGCATGACAAGCTAAGGTCG6228929CAGTCTTGTTGATGAAAAAGAGGCGTTATTTCAAAATACCTATTTCGGA
Pararge aegeria genome assembly, chromosome: 19.
LR990910.1:9532768-9532786
AGGAATATTCTGCATGACAAGTTAAGGTCG9532768CAGTCTTGTTGATGAAAAAGAGGCGTTATTTCAAAATACCTATTTCGGA
Gastracanthus pulcherrimus genome assembly, chromosome: 1.
OX424572.1:108751296-108751314
ATTTCTTTATTTCTCAATAAATTCTATTTT108751296CAGTCTTGTTGATGAAAAAATTATGAATAACAGAAATTTGTGTAGAAAG
Galleria mellonella genome assembly, chromosome: 16.
OY292298.1:3905326-3905344
ATGTTCCATTTGTCACATTTCGTATGGTGG3905326CAGTCTTGTTGATGAAAAAAGATTTCAGGAAGAAAGCATTCGTGTTTCA
Acrobasis repandana genome assembly, chromosome: 26.
OY756240.1:1436281-1436299
CTGTCAGATGAGGGTTAAAATATCAAACAC1436281CAGTCTTGTTGATGAAAAACAACACAAACATTTCTGTGACTAAAAACGC
Symsagittifera roscoffensis genome assembly, chromosome: 2.
OY783235.1:69929184-69929202
AATTCCCGAAGATCCTACAACTGTCATAAA69929184CAGTCTTGTTGATGAAAAAAATTTTTGAAAATCATTTGACACACAAAAA
Symsagittifera roscoffensis genome assembly, chromosome: 2.
OY783235.1:69934624-69934642
AATTCCCGAAGATCCTACAACTGTCATAAA69934624CAGTCTTGTTGATGAAAAAAATTTTTGAAAATCATTTGACACACACAAA
Diplosoma virens genome assembly, chromosome: 8.
OY796887.1:42364098-42364116
TGAAATATTGGATTCAACTCTCAAAAGAAA42364098CAGTCTTGTTGATGAAAAAATCTTCTAAAGGGCTTACTTACGAAGAATA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTTCATCAACAAGACTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTTCATCAACAAGACTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.209 | 0.201 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTTCATCAACAAGACTG&k=0&no_gap=0&offset=0&limit=50
0.318 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=CAGTCTTGTTGATGAAAAA&k=0&no_gap=0&offset=0&limit=29
0.330 | 0.012 | cgi_end;

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