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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-01-10 01:46:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Erinaceus europaeus genome assembly, chromosome: 10.
OX485820.1:32250249-32250267
AAATTATACACCCTGTAATTCATTTAATGT32250249TTTTTCCTCACATTTGGATGCTACAAACCTAATATAAAATATATAATAA
Echeneis naucrates genome assembly, chromosome: 13.
LR584054.1:11014486-11014504
AATACTTTTGTCTCAGACTGGAGTCAGTTT11014486TTTTTCCTCACATTTGGATTTTTGTTTCACAGCTTGGAAAATGTGTTGC
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 23.
LR884482.1:9722090-9722108
AGCTGATAGAATCAAACGTCATAAAATATA9722090TTTTTCCTCACATTTGGATTTTACAGTGCTAACTAAGCCCCATTTTCCA
Electrona antarctica genome assembly, chromosome: 1.
OX578246.1:22962986-22963004
TACCACGTAGATATTTAAAGGGAAAACCTT22962986TTTTTCCTCACATTTGGATAAATAAAGCACACAATTTACAATTTACAAT
Zeus faber genome assembly, chromosome: 9.
OY482853.1:27741101-27741119
TGCTCCCTCACGGCGTGACACCTGCCGCCC27741101TTTTTCCTCACATTTGGATTTCTAGTCTTTTGGATTTTATTGTTGTTGT
Chroicocephalus ridibundus genome assembly, chromosome: 1.
OZ001733.1:131563725-131563743
ATATCAGGAATCAGAAAGCCAGGTTGGTGG131563725TTTTTCCTCACATTTGGATTTATTTATCCTTCAACAACTGACTTGTGCA
Larus fuscus genome assembly, chromosome: 1.
OZ010753.1:130560000-130560018
ATATCAGGAATCAGAAAGCCAGGTTGGTGG130560000TTTTTCCTCACATTTGGATTTATTTATCCTTCAACAACTGACTTGTGCA
Homo sapiens hypothalamus cDNA, RIKEN full-length enriched library, clone:H033018L24, 3' end partial sequence.
DB556990.1:194-212
AGAAAAAGTGGAGTTGGTGAAATCGGTTTT194TTTTTCCTCACATTTGGATGATTTTCATAAAGGTTTTTAGCATGTTCCC
BL-14876 Nilaparvata lugens illumina library Nilaparvata lugens cDNA 5', mRNA sequence.
HS432710.1:459-477
TTGTCTTCCTCGCTTTCCTCCAATTTACTA459TTTTTCCTCACATTTGGATTGGGACGAACAATCTTCATGAATTTGCCCC
TSA: Oncorhynchus mykiss 136111.Onmycontig, mRNA sequence.
EZ899445.1:459-477
TATGAATTTTCTGTATAGACAGAAGTAGTT459TTTTTCCTCACATTTGGATCCACTCTCATAAGCTGCGCTGTTTAAAATG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 11.
CP124721.1:211903889-211903907
CCAACTACGACTTAGCCAAATTTCTTAATT211903889TTTTTCCTCACATTTGGATGCCACTTTCTTATTTATTTCTAACCTCTTG
Misopates orontium genome assembly, chromosome: 6.
OX326951.1:33694517-33694535
TCGGAACGCTCGGGGCTTCACGCTTCAGGC33694517TTTTTCCTCACATTTGGATTCTGTCTTTGCATTTGAAGCCGAATTGTGG
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:245085847-245085865
CCAATAGCCTCCTAACATTTTAACCAAAGT245085847TTTTTCCTCACATTTGGATGTTTATACTTGTCTAATTAGTTTTTAAATC
Marinilongibacter aquaticus strain YYF0007 chromosome, complete genome.
CP083757.1:1535704-1535722
TATTCTTAGCCTGCTCAGTTACTTTTACCA1535704TTTTTCCTCACATTTGGATTACACAAATTTAACCACTCTTTCCCTATAA
Lineus longissimus genome assembly, chromosome: 11.
OU343002.1:17118998-17119016
TGACCCAGCATACATGATCATAGTTGTGAC17118998TTTTTCCTCACATTTGGATTATGTCTTTTATGCTTCATATAGCTCTTCT
Pyralis farinalis genome assembly, chromosome: 9.
OX382266.1:32779842-32779860
CATGCAATTGTTGGTTTTCCATAAAATATT32779842TTTTTCCTCACATTTGGATAGATCTTAAATAATATTAAGAAAACACATT
Malthinus flaveolus genome assembly, chromosome: 1.
OX467285.1:34957838-34957856
GACTTCGAGGAGAGTATATTGTTCCAACAA34957838TTTTTCCTCACATTTGGATGAGGTTTAGCCAGTGCTGTTAACAGGACGA
Gastrophysa polygoni genome assembly, chromosome: 5.
OY755087.1:1043723-1043741
ATCCGAGTACAAGAAGAACTGAATGAAATA1043723TTTTTCCTCACATTTGGATAGGGATTTTCTTCACAACGTTTGGCGATAC
Maratus speciosus genome assembly, chromosome: 2.
OZ010788.1:225661301-225661319
GGAATGCTTTTCCATGACATTTTTTTCAAT225661301TTTTTCCTCACATTTGGATGGCTAATGTTTCATTATGTTACTCTTCTAC
Maratus speciosus genome assembly, chromosome: 3.
OZ010789.1:45707473-45707491
AATGCTTTTTCATGACATTTTTTTTCAATA45707473TTTTTCCTCACATTTGGATGGCTAATCTTTCGTTATGTTACTCTTCCAC
Falco punctatus genome assembly, chromosome: 4.
OY723436.1:92000534-92000552
ACGGGCACAAACTGCAACACAGGCAGTTCC92000534ATCCAAATGTGAGGAAAAACATTACTTGAGGGTGACTGAGCCCTGGCAC
Falco punctatus genome assembly, chromosome: Z.
OY723439.1:84664662-84664680
ACGGGCGCAAACTGGAACCCAGCGAGTTTC84664662ATCCAAATGTGAGGAAAAACATCTTTACGTTGAGGGTGACATGGCCCTG
TSA: Trachemys scripta elegans comp16024_c0_seq1 mRNA sequence.
JW389106.1:669-687
AATGGCTTCCTCTGTTCTGAAGAAATCTGC669ATCCAAATGTGAGGAAAAAGTAGCATAAAGAGGTGAGCATTCTAGTGCA
Capsicum annuum Takanotsume DNA, chromosome 11, sequence.
AP026706.1:66994121-66994139
CAAGAGGTTAGAAATAAATAAGAAAGTGGC66994121ATCCAAATGTGAGGAAAAAAATTAAGAAATTTGGCTAAGTCGTAGTTGG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-19.
CP023131.1:14764306-14764324
CTAACTCCTAAGAATAAAGGTGGAGTCTGA14764306ATCCAAATGTGAGGAAAAAGGAAGATTAAATCTGTGAAAGTAGAGTAAG
Salicornia ramosissima genome assembly, chromosome: 2.
OX596233.1:42944498-42944516
GTCGTGGAGAAGAAAAATGAAGAAATACAC42944498ATCCAAATGTGAGGAAAAAGGATACAAGTTCGTCCCCTTTGCTTTTACC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737402.1:48968182-48968200
GAAAAGTCTAGCAGATCAACAAGATGCTCG48968182ATCCAAATGTGAGGAAAAACTCCGGCTTGCGCTGAGTGATATGGAAAAA
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737654.1:26905586-26905604
GCAAAGTCTAGCGGATCAACAAGATGCTCA26905586ATCCAAATGTGAGGAAAAACTCTGACTTGCGCTGAGTGATATGGAAAAA
Pinctada fucata DNA, chromosome 3, nearly complete sequence, Alternate Pseudohaplotype.
AP027118.1:2396633-2396651
TATTTCTCTTCTTCAAGAAATTTAATTAAC2396633ATCCAAATGTGAGGAAAAAAGCTTTTGAATAAATTCAAATTCACTCAGA
Pterostichus madidus genome assembly, chromosome: 6.
OU452306.1:38523209-38523227
TGATTGAAGGTTTCTTTTATGAACGAAAGA38523209ATCCAAATGTGAGGAAAAAACGAGCTAGCATGAAAGGAACTATAGATGA
Agriphila tristella genome assembly, chromosome: 5.
OV743434.1:25534065-25534083
CCCGAAACTCTTTTATGAATATAATTTTTC25534065ATCCAAATGTGAGGAAAAAATTATAACAATGAATTCTTAAGATTAATAA
Oxystoma pomonae genome assembly, chromosome: 1.
OY998163.1:107156911-107156929
TGGATATACAGTGATGGAGCTGCAATGGAC107156911ATCCAAATGTGAGGAAAAATCACGTCAAAAGGATCTCCACTGGATATCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTTCCTCACATTTGGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTTCCTCACATTTGGAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.513 | 0.505 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTTCCTCACATTTGGAT&k=0&no_gap=0&offset=0&limit=50
0.668 | 0.155 | search_minus_done; http://172.18.8.135:50400/match?q=ATCCAAATGTGAGGAAAAA&k=0&no_gap=0&offset=0&limit=30
0.675 | 0.008 | cgi_end;

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