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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-11 15:24:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

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UCRCS08_0012P08_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0012P08, mRNA sequence.
CV720135.1:646-665
AGATGCCGTCAACACAACATTAATGGCATC646TTTTTGGTCACCCTTTGAGGCCAGCTTTACAATATCGCCGTTTTTGAGCG
UCRCS09_23G02_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-23G02-N4-1-4.b, mRNA sequence.
CX048796.1:680-699
AGATGCCGTCAACACAACATTAATGGCATC680TTTTTGGTCACCCTTTGAGGCCAGCTTTACAATATCGCCGTTTTTGAGCG
Parietaria judaica genome assembly, chromosome: 1.
OX940860.1:17365153-17365172
TTTTTCGGCAAAAATAACCCCATTGAGGTG17365153TTTTTGGTCACCCTTTGAGGCGAAAAAATAAAGTCCATAGATTTTTTTAT
USDA-FP_122000-096 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-49_A01 5', mRNA sequence.
CF506598.1:47-66
CGCTCAAAAACGGCGATATTGTAAAGCTGG47CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004278_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IF_H06 5', mRNA sequence.
CK933824.1:506-525
CGCTCAAAAACGGCGATATTGTAAAGCTGG506CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004227_H09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_H09 5', mRNA sequence.
CK934702.1:507-526
CGCTCAAAAACGGCGATATTGTAAAGCTGG507CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004554_F04 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F04 5', mRNA sequence.
CK935523.1:503-522
CGCTCAAAAACGGCGATATTGTAAAGCTGG503CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004386_G06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0003_IVF_G06 5', mRNA sequence.
CK936118.1:386-405
CGCTCAAAAACGGCGATATTGTAAAGCTGG386CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCG
CGF1004439_B10 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_B10 5', mRNA sequence.
CK938717.1:330-349
CGCTCAAAAACGGCGATATTGTAAAGCTGG330CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004436_G12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_G12 5', mRNA sequence.
CK938896.1:494-513
CGCTCAAAAACGGCGATATTGTAAAGCTGG494CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004436_B04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IF_B04 5', mRNA sequence.
CK938953.1:495-514
CGCTCAAAAACGGCGATGTTGTAAAGCTGG495CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004747_D11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_D11 5', mRNA sequence.
CK939663.1:502-521
CGCTCAAAAACGGCGATATTGTAAAGCTGG502CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004747_A08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIIF_A08 5', mRNA sequence.
CK939687.1:494-513
CGCTCAAAAACGGCGATATTGTAAAGCTGG494CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004746_C02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_C02 5', mRNA sequence.
CK939740.1:505-524
CGCTCAAAAACGGCGATATTGTAAAGCTGG505CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004745_F02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_F02 5', mRNA sequence.
CK939777.1:504-523
CGCTCAAAAACGGCGATATTGTAAAGCTGG504CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004745_D07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_D07 5', mRNA sequence.
CK939803.1:504-523
CGCTCAAAAACGGCGATATTGTAAAGCTGG504CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004745_C02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_C02 5', mRNA sequence.
CK939809.1:465-484
CGCTCAAAAACGGCGATATTGTAAAGCTGG465CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004743_E06 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IIIF_E06 5', mRNA sequence.
CK939948.1:504-523
CGCTCAAAAACGGCGATATTGTAAAGCTGG504CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CGF1004742_B12 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IIF_B12 5', mRNA sequence.
CK940048.1:498-517
CGCTCAAAAACGGCGATATTGTAAAGCTGG498CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
UCRCS08_0012P08_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0012P08, mRNA sequence.
CV720136.1:470-489
CGCTCAAAAACGGCGATATTGTAAAGCTGG470CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
UCRCS09_23G02_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-23G02-N4-1-5.g, mRNA sequence.
CX048797.1:467-486
CGCTCAAAAACGGCGATATTGTAAAGCTGG467CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
C06014D06SK RindPdig24 Citrus clementina cDNA clone C06014D06, mRNA sequence.
CX298682.1:122-141
CGCTCAAAAACGGCGATATTGTAAAGCTGG122CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
Citrus unshiu mRNA, clone: BFC4F04, 5'-end sequence, expressed in flavedo.
DC886117.1:42-61
CGCTCAAAAACGGCGATATTGTAAAGCTGG42CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
Citrus unshiu mRNA, clone: MWYF991, 5'-end sequence, expressed in whole fruit.
DC895370.1:461-480
CGCTCAAAAACGGCGATATTGTAAAGCTGG461CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
wca02a08 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02a08 5', mRNA sequence.
DN134841.1:493-512
CGCTCAAAAACGGCGATATTGTAAAGCTGG493CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
wca02e08 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02e08 5', mRNA sequence.
DN134869.1:493-512
CGCTCAAAAACGGCGATATTGTAAAGCTGG493CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
wca02f01 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02f01 5', mRNA sequence.
DN134874.1:493-512
CGCTCAAAAACGGCGATATTGTAAAGCTGG493CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
wca02g10 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca02g10 5', mRNA sequence.
DN134890.1:493-512
CGCTCAAAAACGGCGATATTGTAAAGCTGG493CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
wca03a10 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03a10 5', mRNA sequence.
DN134903.1:493-512
CGCTCAAAAACGGCGATATTGTAAAGCTGG493CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
wca04a11 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone wca04a11 5', mRNA sequence.
DN134967.1:506-525
CGCTCAAAAACGGCGATATTGTAAAGCTGG506CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CSAB-PNP1240P17 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone CSAB-PNP1240P17 5', mRNA sequence.
DR405283.1:497-516
CGCTCAAAAACGGCGATATTGTAAAGCTGG497CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CSAD-PNP1242G07 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242G07 5', mRNA sequence.
DR405416.1:509-528
CGCTCAAAAACGGCGATATTGTAAAGCTGG509CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CSAD-PNP1242O11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242O11 5', mRNA sequence.
DR405582.1:508-527
CGCTCAAAAACGGCGATATTGTAAAGCTGG508CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CSAD-PNP1242O24 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242O24 5', mRNA sequence.
DR405593.1:508-527
CGCTCAAAAACGGCGATATTGTAAAGCTGG508CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
USDA-FP_17465 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-14_E05 5', mRNA sequence.
DR909337.1:136-155
CGCTCAAAAACGGCGATATTGTAAAGCTGG136CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
KN0AAP3YF22FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261588.1:481-500
CGCTCAAAAACGGCGATATTGTAAAGCTGG481CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
KN0AAP3YI11FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261632.1:207-226
CGCTCAAAAACGGCGATATTGTAAAGCTGG207CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
IC0AAA27DF06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269788.1:484-503
CGCTCAAAAACGGCGATATTGTAAAGCTGG484CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
KN0AAP7YF08FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY270660.1:478-497
CGCTCAAAAACGGCGATATTGTAAAGCTGG478CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
IC0AAA29DG02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY271637.1:473-492
CGCTCAAAAACGGCGATATTGTAAAGCTGG473CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
IC0AAA60CD11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY284159.1:481-500
CGCTCAAAAACGGCGATATTGTAAAGCTGG481CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
IC0AAA80DH09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY292797.1:476-495
CGCTCAAAAACGGCGATATTGTAAAGCTGG476CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
IC0AAA81CC09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY293002.1:481-500
CGCTCAAAAACGGCGATATTGTAAAGCTGG481CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
KN0AAQ2YF04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302203.1:475-494
CGCTCAAAAACGGCGATATTGTAAAGCTGG475CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CS00-C1-101-011-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY659554.1:480-499
CGCTCAAAAACGGCGATATTGTAAAGCTGG480CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CS00-C1-401-013-G12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675681.1:195-214
CGCTCAAAAACGGCGATATTGTAAAGCTGG195CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CS00-C1-401-014-A11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY675699.1:195-214
CGCTCAAAAACGGCGATATTGTAAAGCTGG195CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CS00-C1-401-023-F12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
EY676528.1:485-504
CCCTCACCAACGGCGATATTGAAAAGCTGG485CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGGATCT
CS00-C1-650-017-B08-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY680993.1:62-81
CGCTCAAAAACGGCGATATTGTAAAGCTGG62CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
CR05-C1-100-007-H01-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY758767.1:475-494
CGCTCAAAAACGGCGATATTGTAAAGCTGG475CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:8709187-8709206
CGCTCAAAAACGGCGATATTGTAAAGCTGG8709187CCTCAAAGGGTGACCAAAAAGATGCCATTAATGTTGTGTTGACGGCATCT
Merodon equestris genome assembly, chromosome: 3.
OY284415.1:107186087-107186106
TTGTTCTCGCTAAAGGCAGGCGTGACCACC107186087CCTCAAAGGGTGACCAAAAACAATGCAACAATTACCGAGCAATACAACTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TTTTTGGTCACCCTTTGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTTGGTCACCCTTTGAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.377 | 0.369 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTTGGTCACCCTTTGAGG&k=0&no_gap=0&offset=0&limit=50
2.390 | 2.013 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCAAAGGGTGACCAAAAA&k=0&no_gap=0&offset=0&limit=47
2.421 | 0.031 | cgi_end;

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