GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 20:39:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:2321838-2321862
TAACTTTATAAAATCAGCCTATGACTATAT2321838TTTTTTATTTTACATTTATGTTTGAATGCAAATTTAAATGACAATAAAGTAAACG
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:142606869-142606893
TTAATTTTATAAAATCAGCCTATAACTATA142606869TTTTTTATTTTACATTTATGTTTGAATACAAATTTAAATGACAATAAAGTAAACG
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:2350979-2351003
TAACTTTATAAAATCAGCCTATGACTATAT2350979TTTTTTATTTTACATTTATGTTTGAATGCAAATTTAAATGACAATAAAGTAAACG
Cephonodes hylas Chylas_Sample_A1 DNA, chromosome 10, draft genome sequence.
AP025370.1:10860726-10860750
GTACCACTTTAGCACAACAATTATTCTTCT10860726TTTTTTATTTTACATTTATGTTTGAGTCTGTCAACCCACATTAGGCTGGCGTGGT
Elmis aenea genome assembly, chromosome: 2.
OX393577.1:13388393-13388417
GAAAACTAGGAGTTTATTTAAAAAATATTA13388393TTTTTTATTTTACATTTATGTTTGAATGCATATTTTTAAACCAATTTATGTCAGA
Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:42940585-42940609
AAAAATCTAATAATCTTAATTTCAAAAGTT42940585TCAAACATAAATGTAAAATAAAAAAAAACATCTTATCTCTTCTCGGAAAAAATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/TTTTTTATTTTACATTTATGTTTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : TTTTTTATTTTACATTTATGTTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=TTTTTTATTTTACATTTATGTTTGA&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAACATAAATGTAAAATAAAAAA&k=0&no_gap=0&offset=0&limit=45
0.113 | 0.001 | cgi_end;

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