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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:47:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cyprinus carpio genome assembly, scaffold: LG28, chromosome: 28.
LN590678.1:3346227-3346246
GTATGGTGCTCTATTGATGAATGTTGTCCT3346227TACAGCAGCCACATCAAAGCTCCAGTCTAATGTGGATCTCCAATAGTAAG
Barbus barbus genome assembly, chromosome: 17.
OW387184.1:22654139-22654158
TGATGCTCCATTGATGAGTGTTGGGGACAG22654139TACAGCAGCCACATCAAAGCTCCAGTCTAATGCAGATCTCCAGTAGTAAG
Barbus barbus genome assembly, chromosome: 33.
OW387200.1:20888986-20889005
CACTGTATGATGCTCCAGTGTTGAGGACCG20888986TACAGCAGCCACATCAAAGCTCCAGTCTAATGTCGATCTCCTGTAGTAAG
Rutilus rutilus genome assembly, chromosome: 14.
OX637946.1:17558026-17558045
TGACGCTCCATTGATGAGTCTCAAGGACTG17558026TACAGCAGCCACATCAAAGCTCCAGTCTAATGTGGATTTCCAATAGAGAT
Raja brachyura genome assembly, chromosome: 2.
OY740782.1:28689804-28689823
CTTGGCGTAAATATCACCAGTAATTTATCC28689804TACAGCAGCCACATCAAAGCTATGGTCAAGGAAGCACACCAATGCCTCTA
92-L026096.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 5', genomic survey sequence.
CZ445544.1:252-271
CCCCACCGGTTCAGATTCATGCGGCTCCTG252TACAGCAGCCACATCAAAGCAATCTTTCGGTCATCGAATCTCAACCGTCC
Sphecodes monilicornis genome assembly, chromosome: 2.
OU565285.1:9781133-9781152
TCTGGATGTCCATGGTTGACTGTTTCTACT9781133TACAGCAGCCACATCAAAGCGACACACATATTTCTAATAGAAAATTGAAT
Volucella bombylans genome assembly, chromosome: 1.
OX422140.1:91452770-91452789
ACAGGTACAAATATCGGGGTTATGATGCAC91452770TACAGCAGCCACATCAAAGCCTAAGTATTGTAATTGGAAATGGAATTTAT
Xylota segnis genome assembly, chromosome: 4.
OY757239.1:40760242-40760261
CGATTTCTCACTAAAATGGGTTGACCCGCT40760242TACAGCAGCCACATCAAAGCTTTCAGTTGTATGCTACTTCCTTTTTTCAA
Plagodis dolabraria genome assembly, chromosome: 8.
OY978448.1:23758496-23758515
TCGGGCTGGTAAAGCATTAAAAATGCGGCA23758496TACAGCAGCCACATCAAAGCCGTATAACATTTGTAGGAAAGTATACGGCC
Phoxinus phoxinus genome assembly, chromosome: 12.
OX424420.1:20492253-20492272
ATCCCTATTGGAAATCCACATTAGACTGGA20492253GCTTTGATGTGGCTGCTGTACAGTCCTTGAGACTCATCAATGGAGCGTCA
Squalius cephalus genome assembly, chromosome: 14.
OX439260.1:21347866-21347885
ATCCCTATTGGAAATCCACATTAGACTGGT21347866GCTTTGATGTGGCTGCTGTACAGTCCTTGAGACTCATCAATGGAGCGTCA
Carassius carassius genome assembly, chromosome: 29.
OY720496.1:8420303-8420322
CTTACTACTGGAGATCCACATTAGACTGGA8420303GCTTTGATGTGGCTGCTGTACGGTCCTCAACATTCATCAATGGAGCATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/Tacagcagccacatcaaagc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : Tacagcagccacatcaaagc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.250 | 0.241 | search_plus_done; http://172.18.8.135:50400/match?q=TACAGCAGCCACATCAAAGC&k=0&no_gap=0&offset=0&limit=50
0.348 | 0.098 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTTGATGTGGCTGCTGTA&k=0&no_gap=0&offset=0&limit=40
0.350 | 0.002 | cgi_end;

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