GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:15:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Thalassophryne amazonica genome assembly, chromosome: 6.
LR722971.1:77157002-77157021
ACTCCATTAGAAAATTGACATACGCAATTC77157002AAAATCCAGTTTTCCACCTCCATTTCTAACGTTCTCTGATCCAGTTCTGT
Pelobates cultripes genome assembly, chromosome: 01.
OW240912.1:395677615-395677634
TAATTAATTTGGCACCACAACAATAACTCT395677615AAAATCCAGTTTTCCACCTCTTTTAGGTGTAACCCTTACAATTAGTTTGA
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:25290750-25290769
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25290750AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:24029423-24029442
CAAATAAGAAAGAGAGAAGAGGGATTCCAA24029423AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:23707368-23707387
CAAATAAGAAAGAGAGAAGAGGAATTCCAA23707368AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:24856607-24856626
CAAATAAGAAAGAGAGAAGAGGAATTCCAA24856607AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Avena eriantha genome assembly, chromosome: 3C.
OU342742.1:262538473-262538492
AACCTTGGATCTTAATTTGGAGTTTATAGG262538473AAAATCCAGTTTTCCACCTCTCATATGGCTAAGTCAAGTGTCTGCAGCTC
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:25112739-25112758
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25112739AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica genome assembly, chromosome: 4.
OU696680.1:25129148-25129167
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25129148AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Malus domestica genome assembly, chromosome: 4.
OU744545.1:25083915-25083934
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25083915AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica genome assembly, chromosome: 4.
OU744956.1:25373689-25373708
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25373689AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGA
Malus domestica genome assembly, chromosome: 4.
OU744994.1:25187319-25187338
CAAATAAGAAAGAGAGAAGAGGAATTCCAA25187319AAAATCCAGTTTTCCACCTCTCTCTCTCTCCCTCTCTCTCCCCCCTGACA
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:16821282-16821301
CAAATAAGAAAGAGAGAAGAGGGATTCCAA16821282AAAATCCAGTTTTCCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
Stenurella melanura genome assembly, chromosome: 2.
OY757310.1:175012281-175012300
ATACGATGGTGTGAGATCTACTTATGTTCA175012281AAAATCCAGTTTTCCACCTCAAATGTCCAAGTTAAATCCTTAGATGACTG
Myripristis murdjan genome assembly, chromosome: 22.
LR597571.1:8061027-8061046
GGCTCTCCAGCTTCCCTCATTTAACCTCCC8061027GAGGTGGAAAACTGGATTTTTCTTTCTGGGCTTCAGCTCATTTTCAGACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/aaaatccagttttccacctc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : aaaatccagttttccacctc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.132 | 0.124 | search_plus_done; http://172.18.8.135:50400/match?q=AAAATCCAGTTTTCCACCTC&k=0&no_gap=0&offset=0&limit=50
0.192 | 0.059 | search_minus_done; http://172.18.8.135:50400/match?q=GAGGTGGAAAACTGGATTTT&k=0&no_gap=0&offset=0&limit=36
0.193 | 0.001 | cgi_end;

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