GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Scyliorhinus canicula genome assembly, chromosome: 1.
LR744030.1:278808928-278808946

ACTGAAGCCATGAGGGGTCCCCATTGATAA278808928AAACTGAAGCCATGAGGGCCCCTCCCCCCTCCCAGTCTTGCCCAAATCA

17000532615867 GRN_EB Homo sapiens cDNA 5', mRNA sequence.
CN287539.1:150-168

TTAAATTGACAACCCAATTCAAACCAGTCC150AAACTGAAGCCATGAGGGCCAAGTTCTAGTTTCTTACAGATTTACAATT

Homo sapiens clone RP11-2K19, LOW-PASS SEQUENCE SAMPLING.
AC021896.2:25252-25270

TTAAATTGACAACCCAATTCAAACCAGTCC25252AAACTGAAGCCATGAGGGCCAAGTTCTAGTTTCTTACAGATTTACAATT

Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:5767467-5767485

GCATGAATTGCTCATTTGACACGTGGACTA5767467AAACTGAAGCCATGAGGGCATGCACGCACGGTATATAATCAAGACATTC

Malus domestica genome assembly, chromosome: 8.
OU696684.1:5504152-5504170

GCATGAATTGCTCATTTGACACGTGGACTA5504152AAACTGAAGCCATGAGGGCATGCACGCACGGTATATAATCAAGACATTC

Malus domestica genome assembly, chromosome: 8.
OU744998.1:5765101-5765119

GCATGAATTGCTCATTTGACACGTGGACTA5765101AAACTGAAGCCATGAGGGCATGCACGCACGGTATATAATCAAGACATTC

Malus x robusta genome assembly, chromosome: 7.
OY720331.1:5970392-5970410

GCATGAATTGCTCATTTGACACGTGGACTA5970392AAACTGAAGCCATGAGGGCATGCACGCACGGTATATAATCAAGACATTC

Malus x robusta genome assembly, chromosome: 16.
OY720340.1:5390371-5390389

GCATGGATTGCTCATCTGACACGTGGACTA5390371AAACTGAAGCCATGAGGGCATGCACGCACGGTATATAATAAAGACATTC

Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:6305450-6305468

GCATGAATTGCTCATTTGACACGTGGACTA6305450AAACTGAAGCCATGAGGGCATGCACGCACAGTATATAATCAAGACATTC

Pyrus communis genome assembly, chromosome: 15.
OY757082.1:4276942-4276960

GCATGAATTGCTCATTTGACACGTGGACTA4276942AAACTGAAGCCATGAGGGCATGCACGCACAGTACATAATCAAGACATTC

Cordilura impudica genome assembly, chromosome: 1.
OY821517.1:220203842-220203860

TGAGTAATTTAACTGAACAAGATTTCTTAA220203842AAACTGAAGCCATGAGGGCAAAAAGGTGGTGTTAGCAGACAAAAAAGAG

Human DNA sequence from clone RP11-62J10 on chromosome 1.
AL445426.20:93691-93709

AATTGTAAATCTGTAAGAAACTAGAACTTG93691GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Homo sapiens DNA, chromosome 1, nearly complete genome.
AP023461.1:111031998-111032016

AATTGTAAATCTGTAAGAAACTAGAACTTG111031998GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Homo sapiens isolate CHM13 chromosome 1.
CP068277.2:112247459-112247477

AATTGTAAATCTGTAAGAAACTAGAACTTG112247459GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Homo sapiens isolate NA24385 chromosome 1.
CP139523.1:112379088-112379106

AATTGTAAATCTGTAAGAAACTAGAACTTG112379088GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Homo sapiens isolate NA24385 chromosome 1.
CP139546.1:112490770-112490788

AATTGTAAATCTGTAAGAAACTAGAACTTG112490770GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Lutra lutra genome assembly, chromosome: 16.
LR738418.1:49433211-49433229

TATCACCCTATGACCCAGGATGAGTCATCG49433211GCCCTCATGGCTTCAGTTTCCTGTGGGGACAACCCCTGCCTGTGGCTCT

Chanos chanos genome assembly, chromosome: 1.
LR697106.1:22129883-22129901

TATCTCATCATTGTTGCTGACCAGGTGCAT22129883GCCCTCATGGCTTCAGTTTACAGTTTATACTTCAGGCAGGATAATGTAC

Erithacus rubecula genome assembly, chromosome: 13.
LR812116.1:5859471-5859489

ATTTGACAGATAGAGAATGACAAGATATTA5859471GCCCTCATGGCTTCAGTTTCACCACATCCAGACACAATAAAATATGAAT

Eukaryotic synthetic construct chromosome 1.
CP034512.1:112765184-112765202

AATTGTAAATCTGTAAGAAACTAGAACTTG112765184GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Homo sapiens clone RP11-115O19, WORKING DRAFT SEQUENCE, 22 unordered pieces.
AC013520.4:42598-42616

AATTGTAAATCTGTAAGAAACTAGAACTTG42598GCCCTCATGGCTTCAGTTTGGACTGGTTTGAATTGGGTTGTCAATTTAA

Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:24035111-24035129

GAATGTCTTGATTATATACCGTGCGTGCAT24035111GCCCTCATGGCTTCAGTTTTAGTCCACGTGTCAAATGAGCAATTCATGC

Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:25597374-25597392

GAATGTCTTGATTATATACCGTGCGTGCAT25597374GCCCTCATGGCTTCAGTTTTAGTCCACGTGTCAAATGAGCAATTCATGC

Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:29726067-29726085

GAATGTCTTGATTATATACCGTGCGTGCAT29726067GCCCTCATGGCTTCAGTTTTAGTCCACGTGTCAAATGAGCAATTCATGC

Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:24565578-24565596

GAATGTCTTGATTATATACCGTGCGTGCAT24565578GCCCTCATGGCTTCAGTTTTAGTCCACGTGTCAAATGAGCAATTCATGC

Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141977.1:24497289-24497307

GAATGTCTTGATTATATACCGTGCGTGCAT24497289GCCCTCATGGCTTCAGTTTTAGTCCACGTGTCGAATGAGCAATTCATGC

Metridium senile genome assembly, chromosome: 8.
OX459102.1:14261363-14261381

GCGCAAAACAGGCTGTTGTCAAAATCACCT14261363GCCCTCATGGCTTCAGTTTGTGAAAATCCTGTTTTGAACCACGCATTTG

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Debug Info:

0.009 | 0.009 | search_start;
0.142 | 0.134 | search_plus_done; http://172.18.8.135:50400/match?q=AAACTGAAGCCATGAGGGC&k=0&no_gap=0&offset=0&limit=50
0.197 | 0.055 | search_minus_done; http://172.18.8.135:50400/match?q=GCCCTCATGGCTTCAGTTT&k=0&no_gap=0&offset=0&limit=39
0.208 | 0.010 | cgi_end;

Summary:

Results:

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