GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:40:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jmsf40l21, 5' end.
CJ749013.1:10-33
GGGCCTCTC10AAAGCCCACAAAGCTCTCATGTGTAGCGCCTCTCTCTTTCTCCATTCTCTCTCT
Ipomoea trifida cultivar NCNSP0306 chromosome 15.
CP025658.1:9049277-9049300
GTGAACCGGGCCTTGGCTTTTTAGCCTCTC9049277AAAGCCCACAAAGCTCTCATGTGTTGCGCCTCTCTCCTCTTTCTCCATTCTCTC
Ipomoea triloba cultivar NCNSP0323 chromosome 15.
CP025674.1:10873210-10873233
GTGAACCGGGCCTTGGCTTTTTAGCCTCTC10873210AAAGCCCACAAAGCTCTCATGTGTTGCGCCTCTCTCCTCTTTCTCCATTCTCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/aaagcccacaaagctctcatgtgt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : aaagcccacaaagctctcatgtgt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.281 | 0.273 | search_plus_done; http://172.18.8.135:50400/match?q=AAAGCCCACAAAGCTCTCATGTGT&k=0&no_gap=0&offset=0&limit=50
0.331 | 0.050 | search_minus_done; http://172.18.8.135:50400/match?q=ACACATGAGAGCTTTGTGGGCTTT&k=0&no_gap=0&offset=0&limit=47
0.331 | 0.000 | cgi_end;

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