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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:54:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ipomoea trifida cultivar NCNSP0306 chromosome 2.
CP025645.1:8533405-8533428
AAATCGCTAAAAAGAGTAGGAATAGCAATG8533405AACAACGCAGAGTCGGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGC
Ipomoea triloba cultivar NCNSP0323 chromosome 2.
CP025661.1:2861268-2861291
AAATCGCTAAAAAGAGTAGGAATAGCAATG2861268AACAACGCAGAGTCGGAGAGAGATATGAGGAGAGAATTGAGATCGCAAAAAAGC
Ipomoea nil cDNA clone:jmsf11p21, 5' end.
CJ737707.1:111-134
GCTTTTTTGCGATCTCAATTCTCTCCTCAT111ATCTCTCTCCGACTCTGCGTTGTTCATTGCTATTCCNACTCTTTTTAGCGATTT
Ipomoea nil cDNA clone:jmsf30m17, 5' end.
CJ745098.1:109-132
GCTTTTTTGCGATCTCAATTCTCTCCTCAT109ATCTCTCTCCGACTCTGCGTTGTTCATTGCTATTCCNACTCTTTTTAGCGATTT
Ipomoea nil cDNA clone:jmsf6a06, 5' end.
CJ751972.1:93-116
GCTTTTTTGCGATCTCAATTCTCTCCTCAT93ATCTCTCTCCGACTCTGCGTTGTTCATTGCTATTCCNACTCTTTTTAGCGATTT
Ipomoea nil cDNA clone:jmsf42d09, 5' end.
CJ753813.1:93-116
GCTTTTTTGCGATCTCAATTCTCTCCTCAT93ATCTCTCTCCGACTCTGCGTTGTTCATTGCTATTCCNACTCTTTTTAGCGATTT
Ipomoea nil mRNA, clone: jm50e05, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY926357.1:84-107
GCTTTTTTGCGATCTCAATTCTCTCCTCAT84ATCTCTCTCCGACTCTGCGTTGTTCATTGCTATTCCTACTCTTTTTAGCGATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aacaacgcagagtcggagagagat
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aacaacgcagagtcggagagagat | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.240 | 0.231 | search_plus_done; http://172.18.8.135:50400/match?q=AACAACGCAGAGTCGGAGAGAGAT&k=0&no_gap=0&offset=0&limit=50
0.562 | 0.322 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTCTCTCCGACTCTGCGTTGTT&k=0&no_gap=0&offset=0&limit=48
0.565 | 0.003 | cgi_end;

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