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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 23:43:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

010914AVBC012083PG (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC012083, mRNA sequence.
CN940980.1:149-168
GCGGCTCCTACTTCTTCAGACACAGTAAAT149AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTTTCTCTCTCTCTCT
011001AVBC091087PG (AVBC) Royal Gala young shoot Malus domestica cDNA clone AVBC091087, mRNA sequence.
CN944140.1:149-168
GCGGCTCCTACTTCTTCAGACACAGTAAAT149AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTTTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:24310690-24310709
GCGGCTCCTACTTCTTCAGACACAGTAAAT24310690AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCCCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143371.1:20989505-20989524
GCGGCTCCTACTCCTTCAGAGATAGTGAAT20989505AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:21812345-21812364
GCGGCTCCTACTTCTTCAGACACAGTAAAT21812345AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:18209907-18209926
GCGGCTCCTACTCCTTCAGAGACAGTGAAT18209907AACCTAACCAAACACGTACGTGCTTTGCCCCCCCCCCCCCCCTCTCTCTC
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:24265218-24265237
GCGGCTCCTACTTCTTCAGACACAGTAAAT24265218AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTTTCTCTCTCTCTCT
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:19458038-19458057
GCGGCTCCTACTCCTTCAGAGATAGTGAAT19458038AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 6.
OU696682.1:24525071-24525090
GCGGCTCCTACTTCTTCAGACACAGTAAAT24525071AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTTTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 14.
OU696690.1:20645843-20645862
GCGGCTCCTACTCCTTCAGAGATAGTGAAT20645843AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 6.
OU744547.1:24371959-24371978
GCGGCTCCTACTTCTTCAGACACAGTAAAT24371959AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCCCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 14.
OU744555.1:20995034-20995053
GCGGCTCCTACTCCTTCAGAGATAGTGAAT20995034AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 6.
OU744958.1:24267423-24267442
GCGGCTCCTACTTCTTCAGACACAGTAAAT24267423AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCCCTCCCTCTCTCTCT
Malus domestica genome assembly, chromosome: 14.
OU744966.1:21238435-21238454
GCGGCTCCTACTCCTTCAGAGATAGTGAAT21238435AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 6.
OU744996.1:20406999-20407018
GCGGCTCCTACTTCTTCAGACACAGTAAAT20406999AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTTTCTCTCTCTCTCT
Malus domestica genome assembly, chromosome: 14.
OU745004.1:21211252-21211271
GCGGCTCCTACTCCTTCAGAGATAGTGAAT21211252AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCTCTCT
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:20277553-20277572
GCGGCTCCTACTTCTTCAGACACAGTAAAT20277553AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTTTCTCTCTCTCTCT
Pyrus communis genome assembly, chromosome: 13.
OY757080.1:17701399-17701418
GCGGCTCGTACTCCTTCAGAGACAGTGAAT17701399AACCTAACCAAACACGTACGTGCTTTGCCTCTCTCTCTCTCTCTCATTTG
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141915.1:10628537-10628556
AGAGAGAGAGAGAAAGAGAGAGGCAAAGCA10628537CGTACGTGTTTGGTTAGGTTATTTACTGTGTCTGAAGAAGTAGGAGCCGC
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:10563036-10563055
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA10563036CGTACGTGTTTGGTTAGGTTATTCACTGTCTCTGAAGGAGTAGGAGCCGC
Malus hybrid cultivar cultivar Flame chromosome 6.
CP141932.1:11055362-11055381
AGAGAGAGAGGGAGGGAGAGAGGCAAAGCA11055362CGTACGTGTTTGGTTAGGTTATTTACTGTGTCTGAAGAAGTAGGAGCCGC
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141940.1:11133258-11133277
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA11133258CGTACGTGTTTGGTTAGGTTATTCACTATCTCTGAAGGAGTAGGAGCCGC
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141961.1:10462061-10462080
AGAGAGAGAGAGAAAGAGAGAGGCAAAGCA10462061CGTACGTGTTTGGTTAGGTTATTTACTGTGTCTGAAGAAGTAGGAGCCGC
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141966.1:10314721-10314740
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA10314721CGTACGTGTTTGGTTAGGTTATTCACTGTCTCTGAAGGAGTAGGAGCCGC
Malus hybrid cultivar cultivar Royalty chromosome 9.
CP141978.1:10513893-10513912
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA10513893CGTACGTGTTTGGTTAGGTTATTTACTGTGTCTGAAGAAGTAGGAGCCGC
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141983.1:11459356-11459375
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA11459356CGTACGTGTTTGGTTAGGTTATTCACTATCTCTGAAGGAGTAGGAGCCGC
Malus x robusta genome assembly, chromosome: 15.
OY720339.1:10982998-10983017
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA10982998CGTACGTGTTTGGTTAGGTTATTCACTGTCTCTGAAGGAGTAGGAGCCGC
Crataegus laevigata genome assembly, chromosome: 16.
OY756953.1:11390084-11390103
AGAGAGAGAGAGAGAGAGAGAGGCAAAGCA11390084CGTACGTGTTTGGTTAGGTTAGAGTGAGAGAGAGAGAGAGGCAAAGCACG
Crataegus laevigata genome assembly, chromosome: 16.
OY756953.1:11390132-11390151
TTAGAGTGAGAGAGAGAGAGAGGCAAAGCA11390132CGTACGTGTTTGGTTAGGTTATTCACTGTCTCTGAAGGAGTAGGAGCTGC
Coccinella septempunctata genome assembly, chromosome: 9.
OU015582.1:16565286-16565305
CGATTATTTCACCTGCCGTCGATAGGAAGA16565286CGTACGTGTTTGGTTAGGTTTGCGATACTGCGACACAGCGAAAGCTATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aacctaaccaaacacgtacg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aacctaaccaaacacgtacg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.415 | 0.406 | search_plus_done; http://172.18.8.135:50400/match?q=AACCTAACCAAACACGTACG&k=0&no_gap=0&offset=0&limit=50
0.547 | 0.132 | search_minus_done; http://172.18.8.135:50400/match?q=CGTACGTGTTTGGTTAGGTT&k=0&no_gap=0&offset=0&limit=32
0.556 | 0.008 | cgi_end;

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