GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:43:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

BOT01-97K22TR BOT01 Brassica oleracea genomic clone BOT01-97K22, genomic survey sequence.
FI744883.1:324-346
ATTTGATATTAATCTTGTTTACTTTTGTAG324AACCTGTCATTTTGGAACGCCAAAGAAGAGAGTTTTGACATTTTTTTTTTTTG
BOT01-96L11TF BOT01 Brassica oleracea genomic clone BOT01-96L11, genomic survey sequence.
FI748524.1:324-346
ATTTGATATTAATCTTGTTTACTTTTGTAG324AACCTGTCATTTTGGAACGCCAAAGAAGAGAGTTTTGACATTTTTTTTTTTTG
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:380117-380139
ATTTGATATTAATCTTGTTTACTTTTGTAG380117AACCTGTCATTTTGGAACGCCAAAGAAGAGAGTTTTGACATTTTTTTTTTTGA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41291267-41291289
TCAAAAAAAAAAATGTCAAAACTCTCTTCT41291267TTGGCGTTCCAAAATGACAGGTTCTACAAAAGTAAACAAGATTAATATCAAAT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50549088-50549110
GAAACAAAAAAAATGTCAAAACTCTCTTCT50549088TTGGCGTTCCAAAATGACAGGTTCTACAAAAGTAAACAAGATTAATATCAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/aacctgtcattttggaacgccaa
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : aacctgtcattttggaacgccaa | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.175 | 0.166 | search_plus_done; http://172.18.8.135:50400/match?q=AACCTGTCATTTTGGAACGCCAA&k=0&no_gap=0&offset=0&limit=50
0.212 | 0.037 | search_minus_done; http://172.18.8.135:50400/match?q=TTGGCGTTCCAAAATGACAGGTT&k=0&no_gap=0&offset=0&limit=47
0.214 | 0.001 | cgi_end;

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