GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

MWG974-3 MWG Hordeum vulgare subsp. vulgare genomic clone MWG974 3', genomic survey sequence.
BH854311.1:43-64

TGACCCAACATCTAAATATTTTTTGAGAGA43AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1049J16.
AK357272.1:2235-2256

TGACCCAACATCTAAATATTTTTTGAGAGA2235AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
HG994376.1:18231459-18231480

TGACCCAACATCTAAATATTTTTTGAGAGA18231459AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR722618.1:23365124-23365145

TGACCCAACATCTAAATATTTTTTGAGAGA23365124AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR812263.1:25335327-25335348

TGACCCAACATCTAAATATTTTTTGAGAGA25335327AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR812972.1:23365124-23365145

TGACCCAACATCTAAATATTTTTTGAGAGA23365124AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR824634.1:24964075-24964096

TGACCCAACATCTAAATATTTTTTGAGAGA24964075AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828089.1:24440764-24440785

TGACCCAACATCTAAATATTTTTTGAGAGA24440764AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828103.2:25621483-25621504

TGACCCAACATCTAAATATTTTTTGAGAGA25621483AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828110.1:21907563-21907584

TGACCCAACATCTAAATATTTTTTGAGAGA21907563AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828117.1:23584578-23584599

TGACCCAACATCTAAATATTTTTTGAGAGA23584578AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828134.1:22779660-22779681

TGACCCAACATCTAAATATTTTTTGAGAGA22779660AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828155.1:19423826-19423847

TGACCCAACATCTAAATATTTTTTGAGAGA19423826AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828162.1:25102917-25102938

TGACCCAACATCTAAATATTTTTTGAGAGA25102917AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828169.1:23106542-23106563

TGACCCAACATCTAAATATTTTTTGAGAGA23106542AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828176.1:23766475-23766496

TGACCCAACATCTAAATATTTTTTGAGAGA23766475AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828183.1:22679124-22679145

TGACCCAACATCTAAATATTTTTTGAGAGA22679124AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR828268.1:23216974-23216995

TGACCCAACATCTAAATATTTTTTGAGAGA23216974AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR865397.1:20668963-20668984

TGACCCAACATCTAAATATTTTTTGAGAGA20668963AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
LR890098.1:23511492-23511513

TGACCCAACATCTAAATATTTTTTGAGAGA23511492AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OU015683.1:22696722-22696743

TGACCCAACATCTAAATATTTTTTGAGAGA22696722AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OU015703.1:22618756-22618777

TGACCCAACATCTAAATATTTTTTGAGAGA22618756AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX459904.1:24341201-24341222

TGACCCAACATCTAAATATTTTTTGAGAGA24341201AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX459911.1:24237363-24237384

TGACCCAACATCTAAATATTTTTTGAGAGA24237363AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX459918.1:24672297-24672318

TGACCCAACATCTAAATATTTTTTGAGAGA24672297AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX459925.1:21961104-21961125

TGACCCAACATCTAAATATTTTTTGAGAGA21961104AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX459932.1:25569425-25569446

TGACCCAACATCTAAATATTTTTTGAGAGA25569425AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459972.1:25435204-25435225

TGACCCAACATCTAAATATTTTTTGAGAGA25435204AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX459979.1:26868939-26868960

TGACCCAACATCTAAATATTTTTTGAGAGA26868939AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX459986.1:24273000-24273021

TGACCCAACATCTAAATATTTTTTGAGAGA24273000AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX459993.1:21065062-21065083

TGACCCAACATCTAAATATTTTTTGAGAGA21065062AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX460000.1:25282844-25282865

TGACCCAACATCTAAATATTTTTTGAGAGA25282844AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460007.1:23389968-23389989

TGACCCAACATCTAAATATTTTTTGAGAGA23389968AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCAGCAC

Hordeum vulgare genome assembly, chromosome: 3H.
OX460014.1:25102900-25102921

TGACCCAACATCTAAATATTTTTTGAGAGA25102900AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460021.1:22605020-22605041

TGACCCAACATCTAAATATTTTTTGAGAGA22605020AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX460035.1:24842629-24842650

TGACCCAACATCTAAATATTTTTTGAGAGA24842629AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460049.1:23405177-23405198

TGACCCAACATCTAAATATTTTTTGAGAGA23405177AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460056.1:25812650-25812671

TGACCCAACATCTAAATATTTTTTGAGAGA25812650AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460062.1:22549021-22549042

TGACCCAACATCTAAATATTTTTTGAGAGA22549021AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460070.1:25838106-25838127

TGACCCAACATCTAAATATTTTTTGAGAGA25838106AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460077.1:25844624-25844645

TGACCCAACATCTAAATATTTTTTGAGAGA25844624AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX460084.1:21883336-21883357

TGACCCAACATCTAAATATTTTTTGAGAGA21883336AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460105.1:25357053-25357074

TGACCCAACATCTAAATATTTTTTGAGAGA25357053AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460119.1:23143013-23143034

TGACCCAACATCTAAATATTTTTTGAGAGA23143013AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460147.1:24702056-24702077

TGACCCAACATCTAAATATTTTTTGAGAGA24702056AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460154.1:22910556-22910577

TGACCCAACATCTAAATATTTTTTGAGAGA22910556AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460161.1:25289096-25289117

TGACCCAACATCTAAATATTTTTTGAGAGA25289096AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460175.1:25968587-25968608

TGACCCAACATCTAAATATTTTTTGAGAGA25968587AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460182.1:22407447-22407468

TGACCCAACATCTAAATATTTTTTGAGAGA22407447AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460210.1:21760665-21760686

TGACCCAACATCTAAATATTTTTTGAGAGA21760665AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460217.1:22012950-22012971

TGACCCAACATCTAAATATTTTTTGAGAGA22012950AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460224.1:22755346-22755367

TGACCCAACATCTAAATATTTTTTGAGAGA22755346AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460231.1:25245806-25245827

TGACCCAACATCTAAATATTTTTTGAGAGA25245806AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460238.1:25780820-25780841

TGACCCAACATCTAAATATTTTTTGAGAGA25780820AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460245.1:23872702-23872723

TGACCCAACATCTAAATATTTTTTGAGAGA23872702AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACTGCGAGTCGCACTTGA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460259.1:26382635-26382656

TGACCCAACATCTAAATATTTTTTGAGAGA26382635AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460266.1:24841745-24841766

TGACCCAACATCTAAATATTTTTTGAGAGA24841745AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460273.1:25532966-25532987

TGACCCAACATCTAAATATTTTTTGAGAGA25532966AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACTGCGAGTCGCACTTGA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460280.1:21354254-21354275

TGACCCAACATCTAAATATTTTTTGAGAGA21354254AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX460287.1:22744130-22744151

TGACCCAACATCTAAATATTTTTTGAGAGA22744130AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX460294.1:24045971-24045992

TGACCCAACATCTAAATATTTTTTGAGAGA24045971AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590736.1:26079564-26079585

TGACCCAACATCTAAATATTTTTTGAGAGA26079564AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590750.1:26430589-26430610

TGACCCAACATCTAAATATTTTTTGAGAGA26430589AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare f. agriocrithon genome assembly, chromosome: 3H.
OX590757.1:21517022-21517043

TGACCCAACATCTAAATATTTTTTGAGAGA21517022AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX590764.1:24347167-24347188

TGACCCAACATCTAAATATTTTTTGAGAGA24347167AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGTCGCACTTGAA

Hordeum vulgare genome assembly, chromosome: 3H.
OX638655.1:24590390-24590411

TGACCCAACATCTAAATATTTTTTGAGAGA24590390AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638744.1:23956597-23956618

TGACCCAACATCTAAATATTTTTTGAGAGA23956597AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638772.1:23705034-23705055

TGACCCAACATCTAAATATTTTTTGAGAGA23705034AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGATGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638779.1:23562333-23562354

ATGACCCAACATCTAAATATTTTTGAGAGA23562333AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 3H.
OX638793.1:24489630-24489651

TGACCCAACATCTAAATATTTTTTGAGAGA24489630AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare genome assembly, chromosome: 3H.
OX638807.1:24626228-24626249

TGACCCAACATCTAAATATTTTTTGAGAGA24626228AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 3H.
OX638814.1:24530217-24530238

TGACCCAACATCTAAATATTTTTTGAGAGA24530217AAGGCAAGATTGGACGAGGTTTACCCTGGAGACGACGACTGCGAGTCGCACT

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Debug Info:

0.009 | 0.009 | search_start;
0.137 | 0.128 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGCAAGATTGGACGAGGTTT&k=0&no_gap=0&offset=0&limit=50
0.211 | 0.074 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCTCGTCCAATCTTGCCTT&k=0&no_gap=0&offset=0&limit=0
0.211 | 0.000 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: