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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 12:10:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Muscardinus avellanarius genome assembly, chromosome: 12.
OY726569.1:75405575-75405592
GCATCAACTCCCTGTGCCCTGCTTCAGATG75405575AAGGTTGTCCTTGGTCTGCTGTGAACCCGTCATGATTCATGTGACCAG
Bufo bufo genome assembly, chromosome: 10.
LR991676.1:133097724-133097741
AAACCAAGGAGAACATACAAACTCCATGCA133097724AAGGTTGTCCTTGGTCTGATCTGAACCTAGAACTTAGAACTTAGGTAA
Rana temporaria genome assembly, chromosome: 3.
LR991682.1:21383477-21383494
GAAAAGGTTGTCTATGGTCTGCCCTGGTGA21383477AAGGTTGTCCTTGGTCTGCCCTGGTGAAAAGGTTGTCCTTGGTCCGCC
Rana temporaria genome assembly, chromosome: 3.
LR991682.1:21384310-21384327
AAAAGGTTGTCCTTAATTCGTCCTGCTGAA21384310AAGGTTGTCCTTGGTCTGCCCTGGTGAAAAGGTTGTCCTTGGTCCGAC
Rana temporaria genome assembly, chromosome: 3.
LR991682.1:21384393-21384410
AGAAAGGTTGTCCTTGGTCCGACCTGGTAA21384393AAGGTTGTCCTTGGTCTGCCCTGACTTAAGGGTTGTCCATGGGCTGTC
Telmatherina bonti genome assembly, chromosome: 13.
OW121833.1:14806714-14806731
AGGTTTACTCTTTGGATGAGACTGATTTAT14806714AAGGTTGTCCTTGGTCTGGGTCCAGCTTATTTAAGCTTTTCCCTTCAA
Sequence 7846 from Patent EP1074617.
AX872941.1:483-500
CCCTCTAACAACAAAATACNTGGATTTCNA483AAGGTTGTCCTTGGTCTGGGGGTTGGGAAAAAGAAGAAGAAAAGCNCT
JP 2002191363-A/7846: Primer for synthesizing full-length cDNA and use thereof.
BD153003.1:483-500
CCCTCTAACAACAAAATACNTGGATTTCNA483AAGGTTGTCCTTGGTCTGGGGGTTGGGAAAAAGAAGAAGAAAAGCNCT
Homo sapiens cDNA clone:NT2RP2002066, 3' end, expressed in NT2 neuronal precursor cells after 2-weeks retinoic acid (RA) induction.
AU150236.1:483-500
CCCTCTAACAACAAAATACNTGGATTTCNA483AAGGTTGTCCTTGGTCTGGGGGTTGGGAAAAAGAAGAAGAAAAGCNCT
HA_MX3_01b12_SP6 Lobster Multiple Tissues, Normalized Homarus americanus cDNA clone HA_MX3_01b12 5', mRNA sequence.
FE840983.1:291-308
AAGACTCTCACGGCCTACTTCACAGGAGGG291AAGGTTGTCCTTGGTCTGCTCCCTATGGATAATATTGACCAAGTTCTC
BOT01-40J10TF BOT01 Brassica oleracea genomic clone BOT01-40J10, genomic survey sequence.
FI704668.1:136-153
TAATCAATTTTTGTTACAGATACAAGGCAA136AAGGTTGTCCTTGGTCTGTTGTTATGTATTAATTACATTTTAAAAAAA
PV_GBb033E08.F PV_GBb Phaseolus vulgaris genomic 5', genomic survey sequence.
JY613494.1:410-427
CGCTGCATAGGAGTCGGTGGCATAGCTTGT410AAGGTTGTCCTTGGTCTGTTGAAAGAGTTCATCCTTTTGGACCAACTC
PV_GBb121A15.R PV_GBb Phaseolus vulgaris genomic 3', genomic survey sequence.
JY649035.1:65-82
CGCTGCATAGGAGTCGGTGGCATAGCTTGT65AAGGTTGTCCTTGGTCTGTTGAAAGAGTTCATCCTTTTGGACCAACTC
VUK195J14.R VUK Phaseolus vulgaris genomic 3', genomic survey sequence.
JY801742.1:749-766
CGCTGCATAAGAGTCGGTGGCATAACTTGT749AAGGTTGTCCTTGGTCTGTTGAAAGAATTCATCCTTTTTGACCAACTC
VUK199I17.R VUK Phaseolus vulgaris genomic 3', genomic survey sequence.
JY834539.1:222-239
CGCTGCATAGGAGTCGGTGGCATAGCTTGT222AAGGTTGTCCTTGGTCTGTTGAAAGAGTTCATCCTTTTGGACCAACTC
Mus musculus strain C57BL6/J chromosome 3 clone RP23-168O1, WORKING DRAFT SEQUENCE, 34 unordered pieces.
AC034098.8:194381-194398
GGACAAGCCACACAACTCAGAGGAATAGGA194381AAGGTTGTCCTTGGTCTGGATGCTTACAGCTTTCACTGAGCACAGGTG
Mus musculus clone RP24-430D11, WORKING DRAFT SEQUENCE, 10 unordered pieces.
AC116879.3:183399-183416
GGACAAGCCACACAACTCAGAGGAATAGGA183399AAGGTTGTCCTTGGTCTGGATGCTTACAGCTTTCACTGAGCACAGGTG
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 7.
CP124713.1:87326199-87326216
TGATGGTTGCCAGATCGATTGGCTTCCACT87326199AAGGTTGTCCTTGGTCTGCCTAGGTGACACCGCTAAGGCGACCAAAAG
Trifolium repens isolate ACLI19 chromosome 06_Pall.
CP125847.1:25635690-25635707
CTTCAAACACCTTATTTGAAGATGTTAGTA25635690AAGGTTGTCCTTGGTCTGCCATAAACTTAGCAGACCAAGGACAACTTA
Glycine max cultivar Williams 82 chromosome 19.
CP126444.1:6115816-6115833
ATTCCCTTGAATCTATAAGTTCTTCTGTTT6115816AAGGTTGTCCTTGGTCTGAATTTTTCCATACACGACCCTCCATATGAA
Brassica napus genome assembly, chromosome: C08.
HG994372.1:40813409-40813426
TAATCAATTTTTGTTACAGATACAAGGCAA40813409AAGGTTGTCCTTGGTCTGTTGTTATGTATTAATTACATTTTAAAAAAA
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50089840-50089857
TAATCAATTTTTGTTACAGATACAAGGCAA50089840AAGGTTGTCCTTGGTCTGTTGTTATGTATTAATTACATTTTAAAAAAA
Laetiporus sulphureus genome assembly, chromosome: 4.
OV656677.1:2517238-2517255
GAGGTCGAGGTCGAAGCCCAGTTCTGGTCG2517238AAGGTTGTCCTTGGTCTGTGTTTGGATCATCGTCCAAAGTGCTGATTG
Hedera helix genome assembly, chromosome: 9.
OX359272.1:15247035-15247052
CAAGCTATAGTCTGTGGTGATATGCTGCAT15247035AAGGTTGTCCTTGGTCTGTATATGGTTGTAGCTGAGAAGGCTCGTGTA
Lactuca saligna genome assembly, chromosome: 4.
OX465080.1:263374704-263374721
GAGCAAGATAGTGGTGAAGAGTTTGTAACA263374704AAGGTTGTCCTTGGTCTGAAGACTCCGAAGAAGATGTCCCAAAGGTCA
Idaea dimidiata genome assembly, chromosome: 14.
OX442340.1:2875304-2875321
AGTTTCGCTAACTTTACAGTTAGCTTTTTC2875304AAGGTTGTCCTTGGTCTGAGCTAGTTCATTTCGAGTAAAACCGCGGGG
Mus musculus 10 BAC RP23-383A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence.
AC153551.4:107765-107782
CACCTGTGCTCAGTGAAAGCTGTAAGCATC107765CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971553.1:20021796-20021813
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20021796CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971581.1:20136196-20136213
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20136196CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971602.1:20084119-20084136
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20084119CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus domesticus genome assembly, chromosome: 10.
OW971616.1:19717893-19717910
CACCTGTGCTCAGTGAAAGCTGTAAGCATC19717893CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971644.1:20521207-20521224
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20521207CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus molossinus genome assembly, chromosome: 10.
OW971667.1:20151563-20151580
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20151563CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus spretus genome assembly, chromosome: 10.
OW971686.1:20700431-20700448
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20700431CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCT
Mus musculus genome assembly, chromosome: 10.
OW971700.1:20339290-20339307
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20339290CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971728.1:20070080-20070097
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20070080CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971749.1:20397961-20397978
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20397961CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus musculus genome assembly, chromosome: 10.
OW971770.1:20038699-20038716
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20038699CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971791.1:20443205-20443222
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20443205CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OW971813.1:20311589-20311606
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20311589CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus castaneus genome assembly, chromosome: 10.
OW971826.1:19827145-19827162
CACCTGTGCTCAGTGAAAGCTGTAAGCATC19827145CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTGGTCC
Mus musculus genome assembly, chromosome: 10.
OW971863.1:20199386-20199403
CACCTGTGCTCAGTGAAAGCTGTAAGCATC20199386CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OX389804.1:26374539-26374556
CACCTGTGCTCAGTGAAAGCTGTAAGCATC26374539CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OX390154.1:22110310-22110327
CACCTGTGCTCAGTGAAAGCTGTAAGCATC22110310CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Mus musculus genome assembly, chromosome: 10.
OX439022.1:25040340-25040357
CACCTGTGCTCAGTGAAAGCTGTAAGCATC25040340CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Sylvilagus floridanus genome assembly, chromosome: 2.
OX463224.1:94808263-94808280
CCACCCCTGGACTCAACCCCCTGCAACCTG94808263CAGACCAAGGACAACCTTCCTTTTCAACAGCCCAGCACTCCCATAAAT
Apteryx australis mantelli genome assembly, scaffold: scaffold917.
LK065487.1:129310-129327
CATGGAGGAAGATGTGAGATGTGTCTGGTA129310CAGACCAAGGACAACCTTGCTGCTTCAGAGAGACGGGCTCTGTGTAGC
Scleropages formosus genome assembly, chromosome: 4.
LR584069.1:22081423-22081440
CGGAACGCGATACATGGAGGTGACGGGCAA22081423CAGACCAAGGACAACCTTGACACAGTACACCCCCCCCCCCCACACACA
Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930434N17, 3' end partial sequence.
BB038078.1:159-176
TGGCTCTATCATAGCTACCATTGCATTACT159CAGACCAAGGACAACCTTCATCTAATTTAT
0132045 Brassica napus Root - drought Brassica napus cDNA, mRNA sequence.
EV216937.1:192-209
TTTTTTTAAAATGTAATTAATACATAACAA192CAGACCAAGGACAACCTTTTGCCTTGTATCTGTAACAAAAATTGATTA
TSA: Bubalus bubalis CuffMu8_GeneID_33134 mRNA sequence.
KA545847.1:644-661
TGTAGTCTTTCTGGTACAGAGCATTATAAA644CAGACCAAGGACAACCTTTACCCGAAGTACAAGTTCAGCAGCACTAAC
Mus musculus NOD/MrkTac GSS, clone DN-453N08 5' sequence.
FR288302.1:126-143
CACCTGTGCTCAGCGAAAGCTGTAAGCATC126CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGACC
Mus musculus NOD/MrkTac GSS, clone DN-490J22 5' sequence.
FR315083.1:318-335
CACCTGTGCTCAGTGAAAGCTGTAAGCATC318CAGACCAAGGACAACCTTTCCTATTCCTCTGAGTTGTGTGGCTTGTCC
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:869146-869163
TTTTTTTAAAATGTAATTAATACATAACAA869146CAGACCAAGGACAACCTTTTGCCTTGTATCTGTAACAAAAATTGATTA
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:22052394-22052411
CCTGAATCACAAACCTCTCATATCCTTCGG22052394CAGACCAAGGACAACCTTCAAAACCCAATAAGTTTTCCGCACCTCCCC
Avena sativa genome assembly, chromosome: 2C.
OU342386.1:437064265-437064282
AGGTTTCCTTTGGTTGCTCCGTGCCAACAC437064265CAGACCAAGGACAACCTTTTTCCACGCCAAGACAATCAACTTGTCTTC
Avena sativa genome assembly, chromosome: 9.
OV702287.1:468858244-468858261
AGGTTTCCTTTGGTTGCTCCGTGCCAACAC468858244CAGACCAAGGACAACCTTTTTCCACGCCAAGACAATCAACTTGTCTTC
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:23428904-23428921
TTGTGAAAACTTCCTCGCAACATCTCCCGT23428904CAGACCAAGGACAACCTTCTGTTGCACAAAGCCATCCAGCCTTTGCAA
Caulobacter segnis strain CBR1 chromosome, complete genome.
CP082923.1:2745518-2745535
GCAGGAGGCGTCAACCCCTGCAATTCATCT2745518CAGACCAAGGACAACCTTGCAGGGCGACGGATTCGGATCACCACGTTC
Octopus vulgaris genome assembly, chromosome: 16.
OX597829.1:53219970-53219987
CAATCACTTTGACCTTCTTGGGAGTCCTGG53219970CAGACCAAGGACAACCTTCCCTTGGAATATCATTGATTGTCTGAGTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aaggttgtccttggtctg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aaggttgtccttggtctg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.829 | 0.820 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGTTGTCCTTGGTCTG&k=0&no_gap=0&offset=0&limit=50
1.146 | 0.317 | search_minus_done; http://172.18.8.135:50400/match?q=CAGACCAAGGACAACCTT&k=0&no_gap=0&offset=0&limit=24
1.169 | 0.023 | cgi_end;

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