GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 09:55:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lutra lutra genome assembly, chromosome: 6.
LR738408.1:121372106-121372123
GAAGAAAGGGAGGGCCAGCCATGTTTTCAC121372106AAGTCTTCCGAGCAATGCTAATGCATGCTTAAGTCTGAGAAGCACTAC
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:116923626-116923643
GCATCGGCCTGACTATGCAATGCTAAGTCC116923626AAGTCTTCCGAGCAATGCAGCTAGTAGATAGGACAAGCCCAGTGAGAA
47RDOAH_UP_047_C01_19AUG2004_011 O. Alba 47RDOAH Brassica oleracea cDNA 5', mRNA sequence.
DY029929.1:329-346
GCGTTGGTACGCCACGTTGGATGGCCCCTG329AAGTCTTCCGAGCAATGCACGAACAAAACTTTTACGGACTTGAAGTGG
BOT01-112O12TR BOT01 Brassica oleracea genomic clone BOT01-112O12, genomic survey sequence.
FI761377.1:38-55
GCGTTGGTACGCCACGTTGGATGGCCCCTG38AAGTCTTCCGAGCAATGCACGAACAAAACTTTTACGGACTTGTAAGTT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:868081-868098
GCGTTGGTACGCCACGTTGGATGGCCCCTG868081AAGTCTTCCGAGCAATGCACGAACAAAACTTTTACGGACTTGTAAGTT
Dolichovespula saxonica genome assembly, chromosome: 5.
OU426997.1:6718852-6718869
CTCTTTTTAGGTCTCATTATTCTTCTTCGA6718852AAGTCTTCCGAGCAATGCTCGAGAGAAAACGATCGGTGTTCGAATTCA
Dysmachus trigonus genome assembly, chromosome: X.
OX454324.1:4542612-4542629
CACCACCTCCAGAGACCGACGACGAGGATG4542612AAGTCTTCCGAGCAATGCCCCACGCTAATCAACCAATTTTGGTATGTG
Sepiola atlantica genome assembly, chromosome: 26.
OY744540.1:17528388-17528405
TAAAATAAGAAAAAACAACATGAAAGCATA17528388AAGTCTTCCGAGCAATGCCGGATAGGTATAGTTCTACATAAACTCGTT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50090904-50090921
AACTTACAAGTCCGTAAAAGTTTTGTTCGT50090904GCATTGCTCGGAAGACTTCAGGGGCCATCCAACGTGGCGTACCAACGC
Heyndrickxia oleronia strain FW 1 chromosome, complete genome.
CP079720.1:2383951-2383968
GGTGAGTATCGATCTAAGTACAATCCGTTA2383951GCATTGCTCGGAAGACTTAATACATTCAAAGCAAAATACAATTTTGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/aagtcttccgagcaatgc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : aagtcttccgagcaatgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.217 | 0.208 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTCTTCCGAGCAATGC&k=0&no_gap=0&offset=0&limit=50
0.256 | 0.040 | search_minus_done; http://172.18.8.135:50400/match?q=GCATTGCTCGGAAGACTT&k=0&no_gap=0&offset=0&limit=42
0.258 | 0.001 | cgi_end;

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