GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:56:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil DNA, BAC clone: JMHiBa-015M15, sequence: JMHiBa-015M15.b.
GA934981.1:116-139
AGAGAGAGGAAATGAGGTATGGCGAAGTAA116AAGTGAAGGAGCGGTTTTTGGTTTCTCCGACCTCGAGTTTGACTGCTGTCTGAA
Ipomoea nil cDNA clone:jm37j04, 5' end, single read.
BJ562656.1:5-28
GGAG5AAACCAAAAACCGCTCCTTCACTTTTACTTCGCCATACCTCATTTCCTCTCTCT
Ipomoea nil cDNA clone:jm38m05, 5' end, single read.
BJ563022.1:5-28
GGAG5AAACCAAAAACCGCTCCTTCACTTTTACTTCGCCATACCTCATTTCCTCTCTCT
Ipomoea nil mRNA, clone: jm43o15, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY924032.1:5-28
GGAG5AAACCAAAAACCGCTCCTTCACTTTTACTTCGCCATACCTCATTTCCTCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/aagtgaaggagcggtttttggttt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : aagtgaaggagcggtttttggttt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.143 | 0.134 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTGAAGGAGCGGTTTTTGGTTT&k=0&no_gap=0&offset=0&limit=50
0.270 | 0.127 | search_minus_done; http://172.18.8.135:50400/match?q=AAACCAAAAACCGCTCCTTCACTT&k=0&no_gap=0&offset=0&limit=49
0.272 | 0.002 | cgi_end;

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