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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 21:10:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys kempi genome assembly, chromosome: 9.
OU015363.1:108860610-108860627
ACAACTCAGCCTGTCACCCCATTTATACAG108860610AAGTGTCCACACGCACATGGCTGTACGTGGTGGGCTCCTTCTCCGCCA
Chionomys nivalis genome assembly, chromosome: 5.
OX465453.1:85266670-85266687
GCGTGTGTGTCTGTGCTCACACATGAGCAC85266670AAGTGTCCACACGCACATATGTGCATACACACACCAATAATAAATTCA
Micromys minutus genome assembly, chromosome: 17.
OZ004797.1:21407467-21407484
ATGAGCTCTCAGACACGGTCAGTACCTATC21407467AAGTGTCCACACGCACATGCATGTTTACAATGTACCAACAGTGGGCAC
Scophthalmus maximus chromosome 10.
CP026252.1:11205904-11205921
AGGGGCAGTGGAAATAGGACATAGATATGA11205904AAGTGTCCACACGCACATACACACGTACGCACGTACTACGAAAGCATG
Conger conger genome assembly, chromosome: 8.
OY741321.1:49113520-49113537
TGCTGCTTGGTATTTATTTGTTGTCTAGTT49113520AAGTGTCCACACGCACATTATAAATTATTTAAATTATTTAAATTATAT
Echiichthys vipera genome assembly, chromosome: 9.
OY829654.1:32192510-32192527
TAAGAAAATGAATACTACAATAAACACACT32192510AAGTGTCCACACGCACATTGTTTGTTTTTCTGCTCCCTTTTTTTTACC
Brassica napus genome assembly, chromosome: C08.
HG994372.1:40915914-40915931
ATTTTAACACATCATATTGTCATATATGCC40915914AAGTGTCCACACGCACATTCAATGTATATGAAATGAAATTAAGAACAT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50187292-50187309
ATTTTAACACATCATATTGTCATATATGCC50187292AAGTGTCCACACGCACATTCAATGTATATGAAATAAAATTAAGAACAT
Endotricha flammealis genome assembly, chromosome: 3.
LR990855.1:8476255-8476272
ACAAGAGGAAAATACTGTTCCGACAACTTT8476255AAGTGTCCACACGCACATAAGTATCAAACTACGTTATTTACTGATCAG
Lycia hirtaria genome assembly, chromosome: 6.
OX387380.1:36431793-36431810
AGAGTAGAGAAATATTTTCACCAAAAGTTC36431793AAGTGTCCACACGCACATTATCACAGTATTGAATTTTTATCTCATACC
Carabus problematicus genome assembly, chromosome: X.
OY728577.1:27497209-27497226
TTTCTATAACAATACACTCATAAATCACTT27497209AAGTGTCCACACGCACATACAGAAATGTAAACAGGTCAAGAGGTCATT
Thysanoteuthis rhombus genome assembly, chromosome: 13.
OY735210.1:28645510-28645527
GAGCAAATGTAATTCCAAACAAACAGTGTG28645510AAGTGTCCACACGCACATGAATACACGTATCTGCAGATACAATAATTG
Ennomos erosarius genome assembly, chromosome: 17.
OY756994.1:9935488-9935505
CACACCGTTATATAAACTAGCGTAGTTACG9935488AAGTGTCCACACGCACATTATGATATTGTAGAGGACCAAGTAGCGCCA
Squalius cephalus genome assembly, chromosome: 5.
OX439251.1:7734339-7734356
TAAAAAGAGTACACTTTAAATACCTGGATG7734339ATGTGCGTGTGGACACTTCACACACTCAACTGCTTTATTTACGTAGCA
Ammodytes marinus genome assembly, chromosome: 24.
OX465168.1:5435384-5435401
TTAATGTTTCCCCGCATAAAATAAACAGCG5435384ATGTGCGTGTGGACACTTCTTTGGCTCTCCCCTTCAAGGTAGTGATGA
Carassius carassius genome assembly, chromosome: 47.
OY720514.1:20602994-20603011
AGTTATTAAGTGCTGTGAAGTAGCAAACAT20602994ATGTGCGTGTGGACACTTATGGATGTTAGTTTCAGTGCAGAGGGGTTC
Scophthalmus maximus genome assembly, chromosome: 11.
OY978262.1:14015562-14015579
CATGCTTTCGTAGTACGTGCGTACGTGTGT14015562ATGTGCGTGTGGACACTTTCATATCTATGTCCTATTTCCACTGCCCCT
BOT01-40J10TR BOT01 Brassica oleracea genomic clone BOT01-40J10, genomic survey sequence.
FI706638.1:381-398
ATGTTCTTAATTTCATTTCATATACATTGA381ATGTGCGTGTGGACACTTGGCATATATGACAATATGATGTGTTAAAAT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:764273-764290
ATGTTCTTAATTTCATTTCATATACATTGA764273ATGTGCGTGTGGACACTTGGCATATATGACAATATGATGTGTTAAAAT
Bembecia ichneumoniformis genome assembly, chromosome: 13.
OU342533.1:13223767-13223784
CAAAGTTCCAAAGTACACCGTGCGGCTTCA13223767ATGTGCGTGTGGACACTTTGCTGTAGTGTGCTGGCGCAGTTAGCTGAA
Spilarctia lutea genome assembly, chromosome: 19.
OU696489.1:14173463-14173480
TGCAATGACGTCATACCATTATCTCGTACA14173463ATGTGCGTGTGGACACTTGTTAAATAACTTGAATGGAACCTGTAACAA
Sepioteuthis lessoniana genome assembly, chromosome: 34.
OY757937.1:54795716-54795733
GTGTGGATAGATAAATTGATAGATAGATAG54795716ATGTGCGTGTGGACACTTCCTAGAGGTATGTTTCTCAGGTACAGCATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aagtgtccacacgcacat
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aagtgtccacacgcacat | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.402 | 0.393 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTGTCCACACGCACAT&k=0&no_gap=0&offset=0&limit=50
0.594 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=ATGTGCGTGTGGACACTT&k=0&no_gap=0&offset=0&limit=37
0.600 | 0.006 | cgi_end;

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