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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:10:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BNSCS2CT_UP_144_C11_23APR2007_091 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EV026261.1:20-40
GGGTCGCGTCGATTGGAAA20AATCCCGGAAGCATTTGGTGCCCCGTCAAGATTCGACGATCGTGTTTTGTT
Brassica napus GSS, clone JBnB116I11, end read, primer SACL2(forward).
CU930813.1:457-477
GATTATTCTTCCCGTCGCGTCGATTGGAAA457AATCCCGGAAGCATTTGGTGCCCCGTCAAGATTCGACGATCGTGTTTTGTT
BOT01-97K22TF BOT01 Brassica oleracea genomic clone BOT01-97K22, genomic survey sequence.
FI747347.1:551-571
GATTATTCTTCCCGTCGCGTCGATTGGAAA551AATCCCGGAAGCATTTGGTGCCCCCGTCAAGATTCGACGATCGTGTTTTGT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:41171297-41171317
GATTATTCTTCCCGTCGCGTCGATTGGAAA41171297AATCCCGGAAGCATTTGGTGCCCCGTCAAGATTCGACGATCGTGTTTTGTT
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:50427748-50427768
GATTATTCTTCCCGTCGCGTCGATTGGAAA50427748AATCCCGGAAGCATTTGGTGCCCCGTCAAGATTCGACGATCGTGTTTTGTT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:499901-499921
AACAAAACACGATCGTCGAATCTTGACGGG499901GCACCAAATGCTTCCGGGATTTTTCCAATCGACGCGACGGGAAGAATAATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aatcccggaagcatttggtgc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aatcccggaagcatttggtgc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.263 | 0.254 | search_plus_done; http://172.18.8.135:50400/match?q=AATCCCGGAAGCATTTGGTGC&k=0&no_gap=0&offset=0&limit=50
0.338 | 0.075 | search_minus_done; http://172.18.8.135:50400/match?q=GCACCAAATGCTTCCGGGATT&k=0&no_gap=0&offset=0&limit=45
0.339 | 0.001 | cgi_end;

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