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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-20 05:41:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE.
CR954189.3:87783-87804
AGGTTTCAAATCAAAACCTACATAGACTAC87783AATCTTGTGAGAGGGGATGAAATATCAAACGCACTTCTTAGGGCAATCGAGG
Medicago arabica genome assembly, chromosome: 7.
OX326970.1:40502273-40502294
AGGTTTCAAATCAAAACGTACATAGACTAT40502273AATCTTGTGAGAGGGGATGAAATATCAAACGCACTTCTTAGGGCAATTGAGG
Medicago truncatula clone BAC MtQRRS1_F83005.5, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
JX457607.1:48404-48425
CCTCGATTGCCCTAAGAAGTGCGTTTGATA48404TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGTTTTGATTTGAAACCT
Medicago truncatula clone mth2-21j3, complete sequence.
AC134049.24:119780-119801
CCTCGATTGCCCTAAGAAGTGCGTTTGATA119780TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGTTTTGATTTGAAACCT
Cicer arietinum chromosome Ca2.
CP039332.1:10534571-10534592
CCTCAATTGCTCTTGTAAGTGCTGTTGAAA10534571TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGCTTTGATTTGAAACCT
Cicer arietinum chromosome Ca2.
CP040767.1:10534567-10534588
CCTCAATTGCTCTTGTAAGTGCTGTTGAAA10534567TTTCATCCCCTCTCACAAGATTGTAGTCTATGTAGGCTTTGATTTGAAACCT
Medicago lupulina genome assembly, chromosome: 8.
OY283146.1:17197703-17197724
CCTCAATTGCCCTAAGAAGTGCGTTTGATA17197703TTTCATCCCCTCTCACAAGATTATAGTCTATGTAAGTTTTTATTTGAAACCT
Sepiola atlantica genome assembly, chromosome: 7.
OY744521.1:56303113-56303134
GTCTTGAAGAATAAATCGGAAATGCTTGAC56303113TTTCATCCCCTCTCACAAGATTTCACCTTTGAATTTTACCTTTGTTCTTTGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aatcttgtgagaggggatgaaa
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aatcttgtgagaggggatgaaa | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.714 | 0.706 | search_plus_done; http://172.18.8.135:50400/match?q=AATCTTGTGAGAGGGGATGAAA&k=0&no_gap=0&offset=0&limit=50
0.886 | 0.171 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCATCCCCTCTCACAAGATT&k=0&no_gap=0&offset=0&limit=48
0.890 | 0.004 | cgi_end;

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