GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 06:18:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Maratus michaelseni genome assembly, chromosome: X1.
OZ007586.1:226322297-226322316
TGTTCGGTATGGCATAAAAAAAAAGAACGA226322297ACACGCAGCTGAAACACTTGATGAAAAAACACTTTAATCATAAACATCAC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:19459966-19459985
TCTCTCTCTCTCTCATGCGTGAAACGAGAC19459966CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATATGTTCTTGTGTTTCGC
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:20082696-20082715
TCTCTCTCTCTCTCATGCGTGAAACGAGAC20082696CAAGTGTTTCAGCTGCGTGTCTGTCCCACAATGTGTTCTTGTGGTTTTGC
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:18842943-18842962
TCTCTCTCTCTCTCATGCGTGAAACGAGAC18842943CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATATGTTCTTGTGGTTTCG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:19406738-19406757
TCTCTCTCTCTCTCATGCGTGAAACGAGAC19406738CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATATGTTCTTGTGGTTTCG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:20237288-20237307
TCTCTCTCTCTCTCATGCGTGAAACGAGAC20237288CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATGTGTTCTTGTGGTTTTG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:19788477-19788496
TCTCTCTCTCTCTCATGCGTGAAACGAGAC19788477CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATGTGTTCTTGTGGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:19848334-19848353
TCTCTCTCTCTCTCATGCGTGAAACGAGAC19848334CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATGTGTTCTTGTGGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:19925186-19925205
TCTCTCTCTCTCTCATGCGTGAAACGAGAC19925186CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATGTGTTCTTGTGGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:20591564-20591583
TCTCTCTCTCTCTCATGCGTGAAACGAGAC20591564CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATGTGTTCTTGTGGTTTTG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:19595817-19595836
TCTCTCTCTCTCTCATGCGTGAAACGAGAC19595817CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATGTGTTCTTGTGGTTTTG
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:18857170-18857189
TCTCTCTCTCTCTCATGCGTGAAACGAGAC18857170CAAGTGTTTCAGCTGCGTGTCTGTCCCATCAATATGTTCTTGTGGTTTCG
Hedya salicella genome assembly, chromosome: 3.
FR990099.1:32975269-32975288
AGTAACCTTCACAGTGATATGGGTGTGACT32975269CAAGTGTTTCAGCTGCGTGTTCCCGAATCAAACTATTTAACTGAAAAAAC
Amphimallon solstitiale genome assembly, chromosome: 5.
OY720679.1:33353644-33353663
TCATTAAGCTCTTAGTTTTTGATGTTTCTG33353644CAAGTGTTTCAGCTGCGTGTTTTACCAATCTTACAGAAGTTTAATAAATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/acacgcagctgaaacacttg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : acacgcagctgaaacacttg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=ACACGCAGCTGAAACACTTG&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGTGTTTCAGCTGCGTGT&k=0&no_gap=0&offset=0&limit=49
0.149 | 0.008 | cgi_end;

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