GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 06:57:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Capsicum annuum MGMT_Contig12098, mRNA sequence.
JW062342.1:468-489
AGTAATATAAACTACGCGTTTGACATTAAC468ACATGATAAGCGCAATCTTCAGGGCCCTTGTCCAAATTGTGGAACGGAAAAT
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:332524711-332524732
AGTAATATAAACTACGCGTTTGACATTAAC332524711ACATGATAAGCGCAATCTTCAGGGCCCTTGTCCGAATTGTGGAACGGGAAAT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:333989898-333989919
AGTAATATAAACTACGCGTTTGACATTAAC333989898ACATGATAAGCGCAATCTTCAGGGCCCTTGTCCGAATTGTGGAACGGGAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/acatgataagcgcaatcttcag
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : acatgataagcgcaatcttcag | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.123 | 0.114 | search_plus_done; http://172.18.8.135:50400/match?q=ACATGATAAGCGCAATCTTCAG&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=CTGAAGATTGCGCTTATCATGT&k=0&no_gap=0&offset=0&limit=47
0.152 | 0.000 | cgi_end;

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