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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:28:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

WS02519.B21_C21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02519_C21 3', mRNA sequence.
DT482202.1:92-115
AACATTCAGAAACTGGAAAAAAAAAAAGGG92ACCATCGAGCGTCCTCAAAACCATGAAGAGTTCACTCCATGACCAATAGAGTTC
WS02521.B21_F13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_F13 3', mRNA sequence.
DT482991.1:76-99
AACATTCAGAAACTGGAAAAAAAAACAGGG76ACCATCGAGCGTCCTCAAAACCATGAAGAGTTCACTCCATGACCAATAGAGTTC
WS02545.B21_N09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02545_N09 3', mRNA sequence.
DT490747.1:550-573
AACATTCAGAAACTGGAAAAAAAAACAGGG550ACCATCGAGCGTCCTCAAAACCATGAAGAGTTCACTCCATGACCAATAGAGTTC
WS02424.B21_C19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS02424_C19 3', mRNA sequence.
DT514207.1:605-628
AACATTCAGAAACTGGAAAAAAAAACAGGG605ACCATCGAGCGTCCTCAAAACCATGAAGAGTTCACTCCATGACCAATAGGATTA
WS02448.B21_I03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus deltoides cDNA clone WS02448_I03 3', mRNA sequence.
DT520775.1:515-538
AACATTCAGAAACTGGAAAAAAAAACAGGG515ACCATCGAGCGTCCTCAAAACCATGAAGAGTTCACTCCATGACCAATAGGATTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/accatcgagcgtcctcaaaaccat
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : accatcgagcgtcctcaaaaccat | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.459 | 0.451 | search_plus_done; http://172.18.8.135:50400/match?q=ACCATCGAGCGTCCTCAAAACCAT&k=0&no_gap=0&offset=0&limit=50
0.542 | 0.083 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGTTTTGAGGACGCTCGATGGT&k=0&no_gap=0&offset=0&limit=45
0.542 | 0.000 | cgi_end;

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