GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:04:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea nil cDNA clone:jm11o03, 5' end, single read.
BJ553707.1:216-239
AGGAGAAGAAGAAAACGACTTCGTCCATGG216ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jm2h03, 5' end, single read.
BJ560021.1:221-244
AGGAGAAGAAGAAAACGACTTCGTCCATGG221ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jm32j17, 5' end, single read.
BJ561045.1:263-286
AGGAGAAGAAGAAAACGACTTCGTCCATGG263ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf16n07, 5' end.
CJ739390.1:268-291
AGGAGAAGAAGAAAACGACTTCGTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf24p11, 5' end.
CJ742661.1:268-291
AGGAGAAGAAGAAAACGACTTCNTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf26p16, 5' end.
CJ743387.1:268-291
AGGAGAAGAAGAAAACGACTTCGTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf40m24, 5' end.
CJ749037.1:268-291
AGGAGAAGAAGAAAACGACTTCGTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf42p08, 5' end.
CJ754080.1:268-291
AGGAGAAGAAGAAAACGACTTCGTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf43b18, 5' end.
CJ754133.1:268-291
AGGAGAAGAAGAAAACGACTTCGTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf44f02, 5' end.
CJ754565.1:268-291
AGGAGAAGAAGAAAACGACTTCGTCCATGG268ACGCTAAGGTTCGTCGACTCTTTGGACGGCAGCAGCCTGTTCACAAAGTTCTCG
Ipomoea nil cDNA clone:jmsf40m24, 3' end.
CJ770746.1:748-771
CGAGAACTTTGTGAACAGGCTGCTGCCGTC748CAAAGAGTCGACGAACCTTAGCGTCCATGGACGAAGTCGTTTTCTTCTTCTCCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/acgctaaggttcgtcgactctttg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : acgctaaggttcgtcgactctttg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.543 | 0.534 | search_plus_done; http://172.18.8.135:50400/match?q=ACGCTAAGGTTCGTCGACTCTTTG&k=0&no_gap=0&offset=0&limit=50
0.620 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAGAGTCGACGAACCTTAGCGT&k=0&no_gap=0&offset=0&limit=40
0.621 | 0.001 | cgi_end;

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