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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:23:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

HO13P13w HO Hordeum vulgare cDNA clone HO13P13 3-PRIME, mRNA sequence.
CK569652.1:149-170
ATATACGCACACTCTAGACTAACAGTGTTA149ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0277E05, *** SEQUENCING IN PROGRESS ***, 49 unordered pieces.
AC261461.1:6693-6714
ATATACGCACACTCTAGACTAACAGTGTTA6693ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR722621.1:14785763-14785784
ATATACGCACACTCTAGACTAACAGTGTTA14785763ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR812266.1:13170964-13170985
ATATACGCACACTCTAGACTAACAGTGTTA13170964ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR812975.1:14785763-14785784
ATATACGCACACTCTAGACTAACAGTGTTA14785763ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR824637.1:14402735-14402756
ATATACGCACACTCTAGACTAACAGTGTTA14402735ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828092.1:14714300-14714321
ATATACGCACACTCTAGACTAACAGTTTTA14714300ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828099.1:13001251-13001272
ATATACGCACACTCTAGACTAACAGTGTTA13001251ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828113.1:11206667-11206688
ATATACGCACACTCTAGACTAACAGTGTTA11206667ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828120.1:13061142-13061163
ATATACGCACACTCTAGACTAACAGTGTTA13061142ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828137.1:12239870-12239891
ACATACGCACACTCTAGACTAACAGTGTTA12239870ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828144.1:13914777-13914798
ATATACGCACACTCTAGACTAACAGTGTTA13914777ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828158.1:11458219-11458240
ATATACGCACACTCTAGACTAACAGTGTTA11458219ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828172.1:14060125-14060146
ATATACGCACACTCTAGACTAACAGTGTTA14060125ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828186.1:12612477-12612498
ATATACGCACACTCTAGACTAACAGTGTTA12612477ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828193.1:13975926-13975947
ATATACGCACACTCTAGACTAACAGTGTTA13975926ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828271.1:13743448-13743469
ATATACGCACACTCTAGACTAACAGTGTTA13743448ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR865400.1:12054005-12054026
ATATACGCACACTCTAGACTAACAGTGTTA12054005ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR890101.1:15855274-15855295
ATATACGCACACTCTAGACTAACAGTGTTA15855274ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OU701468.1:11750493-11750514
ATATACGCACACTCTAGACTAACAGTGTTA11750493ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459907.1:15538923-15538944
ATATACGCACACTCTAGACTAACAGTGTTA15538923ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX459914.1:18848001-18848022
ATATACGCACACTCTAGACTAACAGTGTTA18848001ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX459921.1:15773638-15773659
ATATACGCACACTCTAGACTAACAGTGTTA15773638ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX459935.1:15587795-15587816
ATATACGCACACTCTAGACTAACAGTGTTA15587795ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX459975.1:19072590-19072611
ATATACGCACACTCTAGACTAACAGTTTTA19072590ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459982.1:15926055-15926076
ATATACGCACACTCTAGACTAACAGTGTTA15926055ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX459989.1:16505223-16505244
ATATACGCACACTCTAGACTAACAGTGTTA16505223ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX459996.1:15115052-15115073
ACATACGCACACTCTAGACTAACAGTGTTA15115052ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX460003.1:17583063-17583084
ATATACGCACACTCTAGACTAACAGTGTTA17583063ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460010.1:16495548-16495569
ATATACGCACACTCTAGACTAACAGTGTTA16495548ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460017.1:16754257-16754278
ACATACGCACACTCTAGACTAACAGTGTTA16754257ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460024.1:14825743-14825764
ATATACGCACACTCTAGACTAACAGTGTTA14825743ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460045.1:14521489-14521510
ACATACGCACACTCTAGACTAACAGTGTTA14521489ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460052.1:15185909-15185930
ATATACGCACACTCTAGACTAACAGTGTTA15185909ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460073.1:18866969-18866990
ATATACGCACACTCTAGACTAACAGTGTTA18866969ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460087.1:14737634-14737655
ATATACGCACACTCTAGACTAACAGTGTTA14737634ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460094.1:19400349-19400370
ATATACGCACACTCTAGACTAACAGTGTTA19400349ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460115.1:18341507-18341528
ATATACGCACACTCTAGACTAACAGTGTTA18341507ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460122.1:15780031-15780052
ATATACGCACACTCTAGACTAACAGTGTTA15780031ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460129.1:19917320-19917341
ATATACGCACACTCTAGACTAACAGTGTTA19917320ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460143.1:15096109-15096130
ATATACGCACACTCTAGACTAACAGTGTTA15096109ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460150.1:17632621-17632642
ATATACGCACACTCTAGACTAACAGTGTTA17632621ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460157.1:15408387-15408408
ATATACGCACACTCTAGACTAACAGTGTTA15408387ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460164.1:16918032-16918053
ATATACGCACACTCTAGACTAACAGTGTTA16918032ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460171.1:14422695-14422716
ATATACGCACACTCTAGACTAACAGTGTTA14422695ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460178.1:17717405-17717426
ACATACGCACACTCTAGACTAACAGTGTTA17717405ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460185.1:16746696-16746717
ATATACGCACACTCTAGACTAACAGTGTTA16746696ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460199.1:17032101-17032122
ATATACGCACACTCTAGACTAACAGTGTTA17032101ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460206.1:17528875-17528896
ATATACGCACACTCTAGACTAACAGTGTTA17528875ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460213.1:13695190-13695211
ATATACGCACACTCTAGACTAACAGTGTTA13695190ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460220.1:16452351-16452372
ATATACGCACACTCTAGACTAACAGTGTTA16452351ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460227.1:15125824-15125845
ATATACGCACACTCTAGACTAACAGTGTTA15125824ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460248.1:18805117-18805138
ATATACGCACACTCTAGACTAACAGTGTTA18805117ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460255.1:16752055-16752076
ATATACGCACACTCTAGACTAACAGTGTTA16752055ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460262.1:16167366-16167387
ATATACGCACACTCTAGACTAACAGTGTTA16167366ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460269.1:19193490-19193511
ATATACGCACACTCTAGACTAACAGTGTTA19193490ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460276.1:17886837-17886858
ATATACGCACACTCTAGACTAACAGTGTTA17886837ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460283.1:15153880-15153901
ATATACGCACACTCTAGACTAACAGTGTTA15153880ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460290.1:15847469-15847490
ATATACGCACACTCTAGACTAACAGTGTTA15847469ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460297.1:18957803-18957824
ACATACGCACACTCTAGACTAACAGTGTTA18957803ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460304.1:17050742-17050763
ATATACGCACACTCTAGACTAACAGTGTTA17050742ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX460311.1:16670793-16670814
ATATACGCACACTCTAGACTAACAGTGTTA16670793ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590739.1:17029265-17029286
ATATACGCACACTCTAGACTAACAGTGTTA17029265ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590746.1:15084479-15084500
ATATACGCACACTCTAGACTAACAGTGTTA15084479ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590753.1:17095577-17095598
ATATACGCACACTCTAGACTAACAGTGTTA17095577ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 6H.
OX590760.1:16207307-16207328
ATATACGCACACTCTAGACTAACAGTGTTA16207307ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590767.1:16103062-16103083
ATATACGCACACTCTAGACTAACAGTGTTA16103062ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX638658.1:15852750-15852771
ATATACGCACACTCTAGACTAACAGTGTTA15852750ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX638658.1:15947668-15947689
ATATACGCACACTCTAGACTAACAGTGTTA15947668ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX638754.1:16658654-16658675
ATATACGCACACTCTAGACTAACAGTGTTA16658654ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638775.1:16390682-16390703
ATATACGCACACTCTAGACTAACAGTGTTA16390682ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638782.1:16135457-16135478
ATATACGCACACTCTAGACTAACAGTGTTA16135457ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX638796.1:18452873-18452894
ATATACGCACACTCTAGACTAACAGTGTTA18452873ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638803.1:16131624-16131645
ACATACGCACACTCTAGACTAACAGTGTTA16131624ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX638810.1:17957749-17957770
ATATACGCACACTCTAGACTAACAGTGTTA17957749ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638817.1:16032116-16032137
ATATACGCACACTCTAGACTAACAGTGTTA16032116ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare genome assembly, chromosome: 6H.
OX638824.1:17259062-17259083
ATATACGCACACTCTAGACTAACAGTGTTA17259062ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638831.1:15020729-15020750
ACATACGCACACTCTAGACTAACAGTGTTA15020729ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638873.1:15545027-15545048
ATATACGCACACTCTAGACTAACAGTGTTA15545027ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638880.1:18853421-18853442
ATATACGCACACTCTAGACTAACAGTGTTA18853421ACGTCGTCGAGTGGTTGATGTGCTGGACTCTTGCTCCAAGCTGTAGCAATTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/acgtcgtcgagtggttgatgtg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : acgtcgtcgagtggttgatgtg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.421 | 0.412 | search_plus_done; http://172.18.8.135:50400/match?q=ACGTCGTCGAGTGGTTGATGTG&k=0&no_gap=0&offset=0&limit=50
0.576 | 0.155 | search_minus_done; http://172.18.8.135:50400/match?q=CACATCAACCACTCGACGACGT&k=0&no_gap=0&offset=0&limit=0
0.576 | 0.000 | cgi_end;

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