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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-01-09 03:16:06, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 2.
CP141911.1:33943110-33943129
GTGGAAACTCATGGTGAAGGCAACTGGGCA33943110ACTGTTTCCAAGCGATCAGGTTCATTAGTTAGTTATTCATCGTACTCTCT
Malus hybrid cultivar cultivar Flame chromosome 2.
CP141928.1:36570296-36570315
GTGGAAACTCATGGTGAAGGCAACTGGGCA36570296ACTGTTTCCAAGCGATCAGGTTCATTAGTTAGTTATTCATCGTACTCTCT
Malus domestica cultivar Red Fuji chromosome 2.
CP147794.1:36321774-36321793
GTGGAAACTCATGGTGAAGGCAACTGGGCA36321774ACTGTTTCCAAGCGATCAGGTTCATTAGTTAGTTATTCATCGTACTCTCT
Malus domestica cultivar Red Fuji chromosome 2.
CP147819.1:36439235-36439254
GTGGAAACTCATGGTGAAGGCAACTGGGCA36439235ACTGTTTCCAAGCGATCAGGTTCATTAGTTAGTTATTCATCGTACTCTCT
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:34956305-34956324
GTGGAAACTCATGGTGAAGGCAACTGGGCA34956305ACTGTTTCCAAGCGATCAGGTTCATTAGTTAGTTATTCATCGTACTCTCT
Crataegus laevigata genome assembly, chromosome: 5.
OY756942.1:39323537-39323556
GTGGAAACTCATGGTGAAGGCAACTGGGCA39323537ACTGTTTCCAAGCGATCAGGTTCATTAGTTAGTTAGTTATTCATCAGACT
Potentilla sterilis genome assembly, chromosome: 11.
OY821764.1:47101273-47101292
GTGGAGACTCATGGTGAAGGAAACTGGGCA47101273ACTGTTTCCAAGCGATCAGGTTAGTTAGTTACCTTAGATATGCTGATTGC
Fragaria moschata genome assembly, chromosome: 6.
OZ076524.1:22726472-22726491
GTGGAGACTCATGGTGAAGGAAACTGGGCA22726472ACTGTTTCCAAGCGATCAGGTTAGTTGAGCTAAGCTACTTACTGTACTCA
Acaena ovalifolia genome assembly, chromosome: 1.
OZ078268.1:37455483-37455502
GTGGAGACTCATGGTGAAGGAAGCTGGGCA37455483ACTGTTTCCAAGCGATCAGGTTAGTTAATGAACTGTATGTGCTAATGACT
Acaena ovalifolia genome assembly, chromosome: 20.
OZ078287.1:19165538-19165557
GTGGAGACTCATGGTGAAGGAAACTGGGCA19165538ACTGTTTCCAAGCGATCAGGTTAGTTAACCGTATTATGTGCTAATGACTT
Acaena ovalifolia genome assembly, chromosome: 1.
OZ078291.1:37376813-37376832
GTGGAGACTCATGGTGAAGGAAGCTGGGCA37376813ACTGTTTCCAAGCGATCAGGTTAGTTAATGAACTGTATGTGCTAATGACT
Acaena ovalifolia genome assembly, chromosome: 20.
OZ078310.1:18670557-18670576
GTGGAGACTCATGGTGAAGGAAACTGGGCA18670557ACTGTTTCCAAGCGATCAGGTTAGTTAACCGTATTATGTGCTAATGACTT
Rosa agrestis genome assembly, chromosome: 1.
OZ215655.1:74280294-74280313
GTGGAGACTCATGGTGAAGGAAACTGGGCA74280294ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
Rosa agrestis genome assembly, chromosome: 10.
OZ215675.1:87972973-87972992
GTGGAGACTCATGGTGAAGGAAACTGGGCA87972973ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
Rosa agrestis genome assembly, chromosome: 11.
OZ215676.1:87437133-87437152
GTGGAGACTCATGGTGAAGGAAACTGGGCA87437133ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
Rosa agrestis genome assembly, chromosome: 1.
OZ215677.1:74095896-74095915
GTGGAGACTCATGGTGAAGGAAACTGGGCA74095896ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
Rosa agrestis genome assembly, chromosome: 13.
OZ215680.1:72062194-72062213
GTGGAGACTCATGGTGAAGGAAACTGGGCA72062194ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
Rosa spinosissima genome assembly, chromosome: 2.
OZ218467.1:68991745-68991764
GTGGAGACTCATGGTGAAGGAAACTGGGCA68991745ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
Rosa spinosissima genome assembly, chromosome: 4.
OZ218469.1:61927324-61927343
GTGGAGACTCATGGTGAAGGAAACTGGGCA61927324ACTGTTTCCAAGCGATCAGGTTAGTTCATTATGCTAATTACTTCTCATTT
1_Tps_b3v08.
OD097296.1:387-406
GTGCTCTGCTCTACAAAGTTATCAACAGCG387ACTGTTTCCAAGCGATCAGGTCGGGAGGTCATGCTCTAATCTGTTTCTCC
Fragaria x ananassa cultivar Benihoppe chromosome 4.
CP139772.1:1444360-1444379
AATGAGAAGTACAGTAAGTAGCTTAACTAA1444360CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTGACCATGAGTCTCCAC
Fragaria x ananassa cultivar Benihoppe chromosome 3.
CP139773.1:1230346-1230365
TAAGTACAGTAAGTAGCTTAACTTAACTAA1230346CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Fragaria x ananassa cultivar Benihoppe chromosome 2.
CP139774.1:396390-396409
AAGTACAGTAAAGTAGCTTAACTTAACTAA396390CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Fragaria x ananassa cultivar Benihoppe chromosome 2.
CP139774.1:1787587-1787606
AAGTACAGTAAAGTAGCTTAACTTAACTAA1787587CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Fragaria x ananassa cultivar Benihoppe chromosome 1.
CP139775.1:1498641-1498660
TGAGTACAGTAAGTAGCTTAGCTCAACTAA1498641CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141954.1:1648405-1648424
AGAGAGTACGAGGAATAACTAACTAATGAA1648405CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus hybrid cultivar cultivar Royalty chromosome 2.
CP141971.1:1721701-1721720
AGAGAGTACGATGAATAACTAACTAATGAA1721701CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143359.1:1940802-1940821
AGAGAGTACGATGAATAACTAACTAATGAA1940802CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:1834337-1834356
TGATGAATAACTAACTAACTAACTAATGAA1834337CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus ioensis cultivar PI590015 chromosome 2.
CP154725.1:1648319-1648338
TGATGAATAACTAACTAACTAACTAATGAA1648319CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus ioensis cultivar PI590015 chromosome 2.
CP154742.1:1632991-1633010
TGATGAATAACTAACTAACTAACTAATGAA1632991CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus coronaria cultivar PI590014 chromosome 2.
CP154759.1:1711198-1711217
TGATGAATAACTAACTAACTAACTAATGAA1711198CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus coronaria cultivar PI590014 chromosome 2.
CP154776.1:1690418-1690437
TGATGAATAACTAACTAACTAACTAATGAA1690418CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Chaenomeles sinensis isolate sampleA chromosome 07.
CP162370.1:1738103-1738122
AGCGAGTATGATGAATAACTAACTAATGAA1738103CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica cultivar WA 38 chromosome 2B.
CP165685.1:2063727-2063746
AGAGAGTACGATGAATAACTAACTAATGAA2063727CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica cultivar WA 38 chromosome 2A.
CP165702.1:2079712-2079731
AGAGAGTACGATGAATAACTAACTAATGAA2079712CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica cultivar Golden Delicious chromosome 02.
CP168766.1:1911238-1911257
AGAGAGTACGATGAATAACTAACTAATGAA1911238CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica cultivar Golden Delicious chromosome 02.
CP168783.1:2077795-2077814
AGAGAGTACGATGAATAACTAACTAATGAA2077795CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus sylvestris genome assembly, chromosome: 2.
OU696504.1:2160388-2160407
AGAGAGTACGATGAATAACTAACTAATGAA2160388CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica genome assembly, chromosome: 2.
OU696678.1:1940727-1940746
AGAGAGTACGATGAATAACTAACTAATGAA1940727CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica genome assembly, chromosome: 2.
OU744543.1:2062690-2062709
AGAGAGTACGATGAATAACTAACTAATGAA2062690CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica genome assembly, chromosome: 2.
OU744954.1:2110495-2110514
AGAGAGTACGATGAATAACTAACTAATGAA2110495CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Malus domestica genome assembly, chromosome: 2.
OU744992.1:1940646-1940665
AGAGAGTACGATGAATAACTAACTAATGAA1940646CCTGATCGCTTGGAAACAGTTGCCCAGTTGCCTTCACCATGAGTTTCCAC
Comarum palustre genome assembly, chromosome: 17.
OX637588.1:1292261-1292280
GAAGTACAGTAAGTAGCTTAGCTTAACTTA1292261CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTTTCCAC
Rosa rugosa genome assembly, chromosome: 1.
OY288191.1:2239813-2239832
AAATGAGAAGTAATTAGCATAATGAACTAA2239813CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Potentilla sterilis genome assembly, chromosome: 11.
OY821764.1:47437108-47437127
AGTCATTAGCATAATTAATTAGCTAACTAA47437108CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Fragaria vesca genome assembly, chromosome: 6.
OZ071060.1:1518492-1518511
TGAGTACAGTAAGTAGCTTAGCTCAACTAA1518492CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC
Fragaria vesca genome assembly, chromosome: 6.
OZ073122.1:1518493-1518512
TGAGTACAGTAAGTAGCTTAGCTCAACTAA1518493CCTGATCGCTTGGAAACAGTTGCCCAGTTTCCTTCACCATGAGTCTCCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/actgtttccaagcgatcagg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : actgtttccaagcgatcagg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.271 | 0.262 | search_plus_done; http://172.18.8.135:50800/match?q=ACTGTTTCCAAGCGATCAGG&k=0&no_gap=0&offset=0&limit=50
0.431 | 0.161 | search_minus_done; http://172.18.8.135:50800/match?q=CCTGATCGCTTGGAAACAGT&k=0&no_gap=0&offset=0&limit=30
0.450 | 0.019 | cgi_end;

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