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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-05 17:04:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Capsicum annuum MGMT_Contig39122 mRNA sequence.
JW089366.1:924-947
TTGCTGAGAGATTCTGGAATTGTTCCAGTA924ACTTTGTTCCTATCTAAACGCAGGAACTCCAAGTTTGGAAGTTGAGAAAGAGAG
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:4254264-4254287
TTGCTGAGAGATTCTGGAATTGTTCCAGTA4254264ACTTTGTTCCTATCTAAACGCAGGAACTCCAAGTTTGGAAGTTGAGAAAGAGAG
BJ02003H10 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO906540.1:527-550
CTCTCTTTCTCAACTTCCAAACTTGGAGTT527CCTGCGTTTAGATAGGAACAAAGTTACTGG
BJ02004E08 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO906589.1:528-551
CTCTCTTTCTCAACTTCCAAACTTGGAGTT528CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
BJ02030F03 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO908416.1:211-234
CTCTCTTTCTCAACTTCCAAACTTGGAGTT211CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
BJ02032C05 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO908553.1:396-419
CTCTCTTTCTCAACTTCCAAACTTGGAGTT396CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCT
BJ02032E05 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO908567.1:98-121
CTCTCTTTCTCAACTTCCAAACTTGGAGTT98CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTTNCATCAT
BJ02038B04 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO908955.1:445-468
CTCTCTTTCTCAACTTCCAAACTTGGAGTT445CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
BJ02046F12 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO909454.1:520-543
CTCTCTNTCTCAACTTCCAAACTTGGAGTT520CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
BJ03014C05 BJ03 Capsicum annuum cDNA 5', mRNA sequence.
CO911045.1:534-557
CTCTCTTTCTCAACTTCCAAACTTGGAGTT534CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
BJ03017H05 BJ03 Capsicum annuum cDNA 5', mRNA sequence.
CO911332.1:527-550
CTCTCTTTCTCAACTTCCAAACTTGGAGTT527CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAC
KS13048G05 KS13 Capsicum annuum cDNA, mRNA sequence.
GD056009.1:407-430
CTCTCTTTCTCAACTTCCAAACTTGGAGTT407CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS15008E08 KS15 Capsicum annuum cDNA, mRNA sequence.
GD064137.1:430-453
CTCTCTTTCTCAACTTCCAAACTTGGAGTT430CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS15011D09 KS15 Capsicum annuum cDNA, mRNA sequence.
GD064408.1:429-452
CTCTCTTTCTCAACTTCCAAACTTGGAGTT429CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS15014F08 KS15 Capsicum annuum cDNA, mRNA sequence.
GD064714.1:143-166
CTCTCTTTCTCAACTTCCAAACTTGGAGTT143CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS15022F03 KS15 Capsicum annuum cDNA, mRNA sequence.
GD065453.1:541-564
CTCTCTTTCTCAACTTCCAAACTTGGAGTT541CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16001D08 KS16 Capsicum annuum cDNA, mRNA sequence.
GD069519.1:540-563
CTCTCTTTCTCAACTTCCAAACTTGGAGTT540CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16002G06 KS16 Capsicum annuum cDNA, mRNA sequence.
GD069648.1:170-193
CTCTCTTTCTCAACTTCCAAACTTGGAGTT170CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16004G04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD069836.1:465-488
CTCTCTTTCTCAACTTCCAAACTTGGAGTT465CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16006C01 KS16 Capsicum annuum cDNA, mRNA sequence.
GD069975.1:341-364
CTCTCTTTCTCAACTTCCAAACTTGGAGTT341CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16007G09 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070124.1:170-193
CTCTCTTTCTCAACTTCCAAACTTGGAGTT170CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16008D12 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070186.1:532-555
CTCTCTTTCTCAACTTCCAAACTTGGAGTT532CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16008G01 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070210.1:266-289
CTCTCTTTCTCAACTTCCAAACTTGGAGTT266CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16011C03 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070448.1:403-426
CTCTCTTTCTCAACTTCCAAACTTGGAGTT403CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16011F09 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070489.1:536-559
CTCTCTTTCTCAACTTCCAAACTTGGAGTT536CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16013B06 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070629.1:462-485
CTCTCTTTCTCAACTTCCAAACTTGGAGTT462CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16013E05 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070664.1:524-547
CTCTCTTTCTCAACTTCCAAACTTGGAGTT524CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16013G03 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070685.1:266-289
CTCTCTTTCTCAACTTCCAAACTTGGAGTT266CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16014C08 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070738.1:533-556
CTCTCTTTCTCAACTTCCAAACTTGGAGTT533CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16014G03 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070780.1:466-489
CTCTCTTTCTCAACTTCCAAACTTGGAGTT466CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16016E01 KS16 Capsicum annuum cDNA, mRNA sequence.
GD070943.1:541-564
CTCTCTTTCTCAACTTCCAAACTTGGAGTT541CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16021B06 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071374.1:64-87
CTCTCTTTCTCAACTTCCAAACTTGGAGTT64CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16021E02 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071406.1:232-255
CTCTCTTTCTCAACTTCCAAACTTGGAGTT232CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16021F06 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071422.1:263-286
CTCTCTTTCTCAACTTCCAAACTTGGAGTT263CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16022E12 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071511.1:337-360
CTCTCTTTCTCAACTTCCAAACTTGGAGTT337CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16023H06 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071635.1:535-558
CTCTCTTTCTCAACTTCCAAACTTGGAGTT535CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16024E05 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071694.1:235-258
CTCTCTTTCTCAACTTCCAAACTTGGAGTT235CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16025H11 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071831.1:351-374
CTCTCTTTCTCAACTTCCAAACTTGGAGTT351CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16026G02 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071905.1:541-564
CTCTCTTTCTCAACTTCCAAACTTGGAGTT541CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16027B10 KS16 Capsicum annuum cDNA, mRNA sequence.
GD071949.1:465-488
CTCTCTTTCTCAACTTCCAAACTTGGAGTT465CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16028H07 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072110.1:406-429
CTCTCTTTCTCAACTTCCAAACTTGGAGTT406CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16030D11 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072258.1:527-550
CTCTCTTTCTCAACTTCCAAACTTGGAGTT527CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16031F02 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072366.1:465-488
CTCTCTTTCTCAACTTCCAAACTTGGAGTT465CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16031H08 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072396.1:465-488
CTCTCTTTCTCAACTTCCAAACTTGGAGTT465CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16034E05 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072638.1:466-489
CTCTCTTTCTCAACTTCCAAACTTGGAGTT466CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16034G12 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072669.1:536-559
CTCTCTTTCTCAACTTCCAAACTTGGAGTT536CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16036A07 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072782.1:85-108
CTCTCTTTCTCAACTTCCAAACTTGGAGTT85CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16036A11 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072786.1:525-548
CTCTCTTTCTCAACTTCCAAACTTGGAGTT525CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16036E02 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072825.1:533-556
CTCTCTTTCTCAACTTCCAAACTTGGAGTT533CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
KS16036F04 KS16 Capsicum annuum cDNA, mRNA sequence.
GD072839.1:135-158
CTCTCTTTCTCAACTTCCAAACTTGGAGTT135CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:264326671-264326694
CTCTCTTTCTCAACTTCCAAACTTGGAGTT264326671CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAAAATCTCTCAGCAA
Capsicum annuum clone 194 PGIP mRNA, complete cds.
EU560898.1:550-573
CTCTCTTTCTCAACTTCCAAACTTGGAGTT550CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
Capsicum annuum isolate WY130066 polygalacturonase inhibiting protein mRNA, partial cds.
HM070253.1:528-551
CTCTCTTTCTCAACTTCCAAACTTGGAGTT528CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAAAATCTCTCAGCAA
Capsicum annuum cultivar G4 polygalacturonase-inhibiting proteins (PGIP) mRNA, complete cds.
HM132879.1:318-341
ATCTCTTTCTCAACTTCCAAACTTGGAGTT318CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA
Capsicum annuum polygalacturonase inhibiting protein 1 (PGIP-1) gene, complete cds.
JN180922.1:318-341
CTCTCTTTCTCAACTTCCAAACTTGGAGTT318CCTGCGTTTAGATAGGAACAAAGTTACTGGAACAATTCCAGAATCTCTCAGCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/actttgttcctatctaaacgcagg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : actttgttcctatctaaacgcagg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.339 | 0.330 | search_plus_done; http://172.18.8.135:50400/match?q=ACTTTGTTCCTATCTAAACGCAGG&k=0&no_gap=0&offset=0&limit=50
4.444 | 4.106 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGCGTTTAGATAGGAACAAAGT&k=0&no_gap=0&offset=0&limit=48
4.479 | 0.035 | cgi_end;

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