GGGenome | Results

2025-04-07 04:24:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Ipomoea nil cDNA clone:jmsf9l03, 5' end.
CJ753288.1:276-297

CCANCTCCCAACGCGGACCAGNATTTGGAC276GCGATCAACAAAGCCTCAATCTGTACATTCATCATAT

Ipomoea nil mRNA, clone: JMFS024G03, 5' end sequence, expressed in flower and flower bud, cultivar: Tokyo-kokei standard.
HY937793.1:202-223

CCAACTCCCAACGCGGACCAGCATTTGGAC202GCGATCAACAAAGCCTCAATCTGTACATTCATCATATTTATAATCGGCAGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.101 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=AGATTGAGGCTTTGTTGATCGC&k=0&no_gap=0&offset=0&limit=50
0.247 | 0.145 | search_minus_done; http://172.18.8.135:50400/match?q=GCGATCAACAAAGCCTCAATCT&k=0&no_gap=0&offset=0&limit=50
0.248 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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