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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-15 22:07:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

537035 Solanum DArT library Solanum bulbocastanum/Solanum commersonii mixed library genomic, genomic survey sequence.
KG962904.1:4-24
TGC4AGCGGACAGTCTGCATATTTCAGACAAATAAAACATGAGGTAGAAGTAAAA
Solanum pinnatisectum cultivar CGN17745 chromosome 3.
CP047566.1:60746527-60746547
GACTAATACTCAGTGCATCCTTCATTCTGC60746527AGCGGACAGTCTGCATATTTCAGACAAATAAAACATGAGGTAGAAGTAAAC
Solanum verrucosum cultivar 11H23 chromosome 3.
CP133614.1:57444543-57444563
GACTAATACTCGGTGCATCCTTCATTCTGC57444543AGCGGACAGTCTGCATATTTCAGACAAATAAAACATGAGGTAGAAGTAAAC
GP295 Solanum tuberosum genomic sequence library GP Solanum tuberosum genomic clone GP295, genomic survey sequence.
CG783225.1:679-699
TTTTACTTCTACCTCATGTTTTATTTGTCT679GAAATATGCAGACTGTCCGCTGCAG
Hydrotaea diabolus genome assembly, chromosome: 4.
OY740719.1:64135042-64135062
AGGAAGACGCTTTTTATCTTGTTTTAAAAG64135042GAAATATGCAGACTGTCCGCTTTTTGAAAAAACGTAAAGGATTCATAATGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/agcggacagtctgcatatttc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : agcggacagtctgcatatttc | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.415 | 0.407 | search_plus_done; http://172.18.8.135:50400/match?q=AGCGGACAGTCTGCATATTTC&k=0&no_gap=0&offset=0&limit=50
0.532 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=GAAATATGCAGACTGTCCGCT&k=0&no_gap=0&offset=0&limit=47
0.533 | 0.001 | cgi_end;

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