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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:12:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cottoperca gobio genome assembly, chromosome: 19.
LR131926.1:19618394-19618411
GATGTCACTTTGGATTCTTCCCAGTAGGAG19618394AGCTGAAGTGCGTGACTTTCATGTTGTGCCATCAGTACATATTTAGCG
Echeneis naucrates genome assembly, chromosome: 2.
LR584043.1:1876385-1876402
CAATTTTGTACTCGTATTTTGGACTTTGGA1876385AGCTGAAGTGCGTGACTTAAGTTCAACTGGAGCCCCCATCTGTTAGCT
Sequence 6457 from Patent EP2147012.
HI515728.1:41-58
TATCAAGAGACCGAACTTGTCAACTGCAAA41AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
BOGQR19TF BOGQ Brassica oleracea genomic clone BOGQR19, genomic survey sequence.
BH581641.1:542-559
AGAGTGCTTAGACATCTTCTTGCCAGGAGG542AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCTTATCCTTAGCTTT
BONQU81TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONQU81, genomic survey sequence.
BZ494508.1:520-537
AGAGTGCTTAGACATCTTCTTGCCAGGAGG520AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCCTATCCTTAGCTTT
PUFFD92TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa305O16, genomic survey sequence.
BZ804937.1:744-761
TATCAAGAGACCGAACTTGTCAACTGCAAA744AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
PUFGH79TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa312N14, genomic survey sequence.
BZ826747.1:779-796
TATCAAGAGACCGAACTTGTCAACTGCAAA779AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
ZMMBBb0259E17.f ZMMBBb Zea mays subsp. mays genomic clone ZMMBBb0259E17 5', genomic survey sequence.
CG430134.1:148-165
TATCAAGAGACCGAACTTGTCAACTGCAAA148AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
ZMMBBb0599H09r ZMMBBb (HindIII) Zea mays subsp. mays genomic clone ZMMBBb0599H09 3', genomic survey sequence.
CL250543.1:260-277
TATCAAGAGACCGAACTTGTCAACTGCAAA260AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
BOT01-13N3TF BOT01 Brassica oleracea genomic clone BOT01-13N3, genomic survey sequence.
FI680993.1:12-29
CCGCCAGGAGG12AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCCTATCCTTAGCTTT
Zea mays cultivar B73 chromosome 5 clone CH201-307K10, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC186166.4:158231-158248
TATCAAGAGACCGAACTTGTCAACTGCAAA158231AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Zea mays cultivar B73 chromosome 5 clone ZMMBBb-160O23, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.
AC197006.4:3399-3416
TATCAAGAGACCGAACTTGTCAACTGCAAA3399AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Zea mays cultivar B73 chromosome 3 clone CH201-280F22, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC203095.5:45110-45127
TATCAAGAGACCGAACTTGTCAACTGCAAA45110AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Zea mays cultivar B73 chromosome 6 clone ZMMBBb-130K4, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.
AC203162.5:84214-84231
TATCAAGAGACCGAACTTGTCAACTGCAAA84214AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Zea mays cultivar B73 chromosome 3 clone CH201-171P7, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC210619.4:89425-89442
TATCAAGAGACCGAACTTGTCAACTGCAAA89425AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence.
AC149635.1:54825-54842
AGAGTGCTTAGACATCTTCTTGCCAGGAGG54825AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCTTATCCTTAGCTTT
Zea mays cultivar LT2357 chromosome 3.
CP116741.1:198627010-198627027
TATCAAGAGACCGAACTTGTCAACTGCAAA198627010AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Zea mays cultivar LT2357 chromosome 6.
CP116744.1:3683534-3683551
TATCAAGAGACCGAACTTGTCAACTGCAAA3683534AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Brassica napus cultivar Xiang5A chromosome 11.
CP123886.1:10730984-10731001
AGAGTGCTTAGACATCTTCTTGCCAGGAGG10730984AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCTTATCCTTAGCTTT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:744564-744581
AGAGTGCTTAGACATCTTCTTGCCAGGAGG744564AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCCTATCCTTAGCTTT
Brassica napus genome assembly, chromosome: A02.
HG994356.1:10584219-10584236
AGAGTGCTTAGACATCTTCTTGCCAGGAGG10584219AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCTTATCCTTAGCTTT
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:3383261-3383278
AGAGTGCTTAGACATCTTCTTGCCAGGAGG3383261AGCTGAAGTGCGTGACTTAGCAGCCTTTGTGCTCTTATCCTTAGCTTT
Zea mays genome assembly, chromosome: 3.
LR897969.1:200601498-200601515
TATCAAGAGACCGAACTTGTCAACTGCAAA200601498AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Zea mays genome assembly, chromosome: 6.
LR897972.1:3778817-3778834
TATCAAGAGACCGAACTTGTCAACTGCAAA3778817AGCTGAAGTGCGTGACTTGAATCTATCTTTTCCGGACAGGGCTATACT
Rosa rugosa genome assembly, chromosome: 3.
OY288193.1:5397817-5397834
AGAACCTAAGTCTAGGCAAGATTGGTCTAT5397817AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Rosa rugosa genome assembly, chromosome: 5.
OY288195.1:24016632-24016649
AGAACCTAAGTCTAGGCAAGATTGGTCTAT24016632AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Rosa rugosa genome assembly, chromosome: 5.
OY288195.1:24019437-24019454
AGAACCTAAGTCTAGGCAAGATTGGTCTAT24019437AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Rosa rugosa genome assembly, chromosome: 5.
OY288195.1:24022242-24022259
AGAACCTAAGTCTAGGCAAGATTGGTCTAT24022242AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Rosa rugosa genome assembly, chromosome: 5.
OY288195.1:24025047-24025064
AGAACCTAAGTCTAGGCAAGATTGGTCTAT24025047AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Rosa rugosa genome assembly, chromosome: 7.
OY288197.1:4558079-4558096
AGAACCTAAGTCTAGGCAAGATTGGTCTAT4558079AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Rosa rugosa genome assembly, chromosome: 7.
OY288197.1:22509501-22509518
AGAACCTAAGTCTAGGCAAGATTGGTCTAT22509501AGCTGAAGTGCGTGACTTTAACAATGATGTTAAAGCACGGCACAGCTT
Acinetobacter bouvetii JCM 18991 DNA, complete genome.
AP024595.1:1143534-1143551
GCCTGCAGTAACCACCCGCGGTTTCGGCGA1143534AGCTGAAGTGCGTGACTTGGCTGGCTGGATCGCAGACATTTTGGATGC
Chrysolina oricalcia genome assembly, chromosome: 9.
OX101817.2:26205687-26205704
TTTTGAGGACGGTGCTCCAGCACACTTTAC26205687AGCTGAAGTGCGTGACTTTCTTGACCATGGATCAGACCATATTTGGTG
Merzomyia westermanni genome assembly, chromosome: 1.
OX465288.1:75449920-75449937
GTGTTTACGACAAAAAACAGATACTCTTCA75449920AGCTGAAGTGCGTGACTTGCATTGTAAGCTTACTGAGAATAATTGAAA
Merzomyia westermanni genome assembly, chromosome: 2.
OX465289.1:54358434-54358451
GTGTTTGCGACAAAAAACAGATTCTCCTGA54358434AGCTGAAGTGCGTGACTTGCATTGTAAGCTTATTGAGAATAATTCAAA
Dioctria rufipes genome assembly, chromosome: 2.
OZ002741.1:34944293-34944310
AAAAATTTTTAATAAATTTTGACACATTCC34944293AGCTGAAGTGCGTGACTTTCTTCAAATATTTTTAATTTGTGTGTGTGT
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:508925355-508925372
GAGACCACGGCATTTTCAGTCTGAAAGCTG508925355AAGTCACGCACTTCAGCTCCAGTAACCTTACTGAAATAGCCCGTTCGG
Bufo bufo genome assembly, chromosome: 4.
LR991670.1:508974950-508974967
GAGACCACGGCATTTTCAGTCTGAAAGCTG508974950AAGTCACGCACTTCAGCTCCAGTAACCTTACTGAAATAGCCCGTTCGG
Ammodytes marinus genome assembly, chromosome: 12.
OX465156.1:23403483-23403500
GTTACTCATACTTCCTCATGGGGGAGACAC23403483AAGTCACGCACTTCAGCTTAAAGTATAGAAAACTAGACGTTAAATATA
PUFFD92TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa305O16, genomic survey sequence.
BZ804942.1:719-736
AGTATAGCCCTGTCCGGAAAAGATAGATTC719AAGTCACGCACTTCAGCTTTTGCAGTTGACAAGTTCGGTCTCTTGATA
PUFGH79TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa312N14, genomic survey sequence.
BZ826750.1:269-286
AGTATAGCCCTGTCCGGAAAAGATAGATTC269AAGTCACGCACTTCAGCTTTTGCAGTTGACAAGTTCGGTCTCTTGATA
Brassica napus genome assembly, chromosome: A05.
HG994359.1:3850924-3850941
AAAGCTAAGGATAAGAGCACAAAGGCTGCT3850924AAGTCACGCACTTCAGCTCCTCCTGGCAAGAAGATGTCTAAGCACTCT
Brassica napus genome assembly, chromosome: C05.
HG994369.1:45676796-45676813
AAAGCTAAGGATAAGAGCACAAAGGCTGCT45676796AAGTCACGCACTTCAGCTCCTCCTGGCAAGAAGATGTCTAAGCACTCT
Brassica napus genome assembly, chromosome: C08.
HG994372.1:40935636-40935653
AAAGCTAAGGATAGGAGCACAAAGGCTGCT40935636AAGTCACGCACTTCAGCTCCTCCTGGCAAGAAGATGTCTAAGCACTCT
Brassica oleracea HDEM genome, scaffold: C5.
LR031877.1:44317298-44317315
AAAGCTAAGGATAAGAGCACAAAGGCTGCT44317298AAGTCACGCACTTCAGCTCCTCCTGGCAAGAAGATGTCTAAGCACTCT
Rosa rugosa genome assembly, chromosome: 2.
OY288192.1:5521593-5521610
AAGCTGTGCCGTGCTTTAACATCATTGTTA5521593AAGTCACGCACTTCAGCTATAGACCAATCTTGCCTAGACTTAGGTTCT
Rosa rugosa genome assembly, chromosome: 2.
OY288192.1:42662498-42662515
AAGCTGTGCCGTGCTTTAACATCATTGTTA42662498AAGTCACGCACTTCAGCTATAGACCAATCTTGCCTAGACTTAGGTTCT
Rosa rugosa genome assembly, chromosome: 3.
OY288193.1:10377074-10377091
AAGCTGTGCCGTGCTTTAACATCATTGTTA10377074AAGTCACGCACTTCAGCTATAGACCAATCTTGCCTAGACTTAGGTTCT
Rosa rugosa genome assembly, chromosome: 4.
OY288194.1:32822509-32822526
AAGCTGTGCCGTGCTTTAACATCATTGTTA32822509AAGTCACGCACTTCAGCTATAGACCAATCTTGCCTAGACTTAGGTTCT
Acinetobacter sp. WCHAc010034 chromosome, complete genome.
CP032279.1:743278-743295
GCATCCAGAATGTCTGCAATCCAGCCAGCC743278AAGTCACGCACTTCAGCTTCGCCAAAACCGCGGGTTGTCACTGCAGGC
Proteus vulgaris strain HH17 chromosome, complete genome.
CP054157.1:2625964-2625981
AATGAGTTCGGAATATTATTATTTTTTAAA2625964AAGTCACGCACTTCAGCTGGCGTTTTAAGACCTTTCGCTTTTATCTGA
Carcina quercana genome assembly, chromosome: Z.
OU342426.1:8350558-8350575
ATGTCACATCGATTATACATTTTATCACAT8350558AAGTCACGCACTTCAGCTCAAGTCACCTTACACCATCATTTAATTTTA
Thymelicus sylvestris genome assembly, chromosome: 13.
OU426898.1:14720890-14720907
GAAGGGATTATTCTGAGAAATGTCGTGCTG14720890AAGTCACGCACTTCAGCTTACTCACGCGTTGACACGTCATCGCTGGGA
Eilema depressum genome assembly, chromosome: 27.
OU612039.1:4461164-4461181
TTATTATCAGTGTTTGAAGTTTATATTACC4461164AAGTCACGCACTTCAGCTTGACACCGACGTGTGGCGGCATGACGCACG
Chrysolina oricalcia genome assembly, chromosome: 6.
OX101814.2:57587406-57587423
CACCAAATATGGTCTGATCCATGGTCAAGA57587406AAGTCACGCACTTCAGCTGTAAAGTGTGCTGGAGCACCGTCCTGTTGG
Cheilosia impressa genome assembly, chromosome: 1.
OX411880.1:37386402-37386419
GCCTACAAGTGTTTTTCCGAAAAATTCTTG37386402AAGTCACGCACTTCAGCTCATTTCTGAGTTCTGCGAGTTCATGAATTG
Merzomyia westermanni genome assembly, chromosome: 3.
OX465290.1:111632460-111632477
TTTGAATTATTCTCAGTAAGCTTACAATGC111632460AAGTCACGCACTTCAGCTTGAAGAGAATCTGTTTTTTGTCGTAAACAC
Merzomyia westermanni genome assembly, chromosome: 5.
OX465292.1:133947623-133947640
TTTGAATTATTCTCAGTAAGCTTACAATGC133947623AAGTCACGCACTTCAGCTTGAAGAGAATCTGTTTTTTGTCGTTAACAC
Merzomyia westermanni genome assembly, chromosome: 6.
OX465293.1:53108674-53108691
CTTGAATTATTCTCAGTAAGCTTACAATGC53108674AAGTCACGCACTTCAGCTTGAAGAGAATCTGTTTTTTTGTCGTAAACA
Pandemis heparana genome assembly, chromosome: 20.
OY978026.1:13429896-13429913
GTCATAATGCTATTTAATTCTGAGTGGGCA13429896AAGTCACGCACTTCAGCTAGTATCTGTGACTCTAGTGATACTACTTAT
Sepia lycidas genome assembly, chromosome: 24.
OZ010594.1:75441869-75441886
TCGTACAATTTGAGCGATCATTTGGTGAAG75441869AAGTCACGCACTTCAGCTGAAAAGAGATTAAACGCAATGGCGTAAGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/agctgaagtgcgtgactt
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : agctgaagtgcgtgactt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.329 | 0.321 | search_plus_done; http://172.18.8.135:50400/match?q=AGCTGAAGTGCGTGACTT&k=0&no_gap=0&offset=0&limit=50
0.532 | 0.203 | search_minus_done; http://172.18.8.135:50400/match?q=AAGTCACGCACTTCAGCT&k=0&no_gap=0&offset=0&limit=14
0.549 | 0.017 | cgi_end;

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