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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 07:46:03, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 15.
OU383788.1:1023769-1023788
AGAATCCTCTTTATTTTCCAGCTCCTCTGT1023769AGGAGGGATTGTTTGTGCACTGAGCAGAGGAAAAAATTAGCATTGTTAAT
Mdlv4-4042H19_e28726.b1 Mdlv4 Malus domestica cDNA 3', mRNA sequence.
GO577753.1:429-448
AGCAGTAACAAGAAGCATGGATGATAAAAA429AGGAGGGATTGTTTGTGCACCAGTACAGAATAGTAATGCTGCTGAAGAGA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:5238002-5238021
AGCAGTAACAAGAAGCCTTGACGATCAAAA5238002AGGAGGGATTGTTTGTGCACTTGTACATAGTAGTACTGCTGCTGCTGATG
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:3968072-3968091
AGCAGTAACAAGAAGCATGGATGATAAAAA3968072AGGAGGGATTGTTTGTGCACCAGTACAGAATAGTAATGCTGCTGAAGAGA
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:6234715-6234734
AGCAGTAACAAGAAGCCTTGACGATCAAAA6234715AGGAGGGATTGTTTGTGCACTTGTACATAGTAGTACTGCTGCCGCTGATG
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:4025630-4025649
AGCAGTAACAAGAAGCATGGATGATAAAAA4025630AGGAGGGATTGTTTGTGCACCAGTACAGAATTGTAATGCTGCTGAAGAGA
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:5212872-5212891
AGCAGTAACAAGAAGCCTTGACGATCAAAA5212872AGGAGGGATTGTTTGTGCACTTGTACATAGTAGTACTGCTGCTGCTGATG
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:5582319-5582338
AGCAGTAACAAGAAGCCTTGACGATCAAAA5582319AGGAGGGATTGTTTGTGCACTTGTACATAGTAGTACTGCTGCTGCTGATG
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:5143094-5143113
AGCAGTAACAAGAAGCCTTGACGATCAAAA5143094AGGAGGGATTGTTTGTGCACTTGTACATAGTAGTACTGCTGCTGCTGATG
Sthenelais limicola genome assembly, chromosome: 7.
OW804100.1:93875123-93875142
TGCGCGAATGACTTGTGTCATTATTGACAT93875123AGGAGGGATTGTTTGTGCACGAATTTATGTCCACGCAAAAATATCTGAAG
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:27369876-27369895
TCTCTTCAGCAGCATTACTATTCTGTACTG27369876GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTGTTGTTACTGCT
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:50491417-50491436
CATCAGCAGCAGCAGTACTACTATGTACAA50491417GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:28399112-28399131
TCTCTTCAGCAGCATTACTATTCTGTACTG28399112GTGCACAAACAATCCCTCCTTTTTTTATCATCCATGCTTGTTGTTACTGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:44199407-44199426
CATCAGCAGCAGCAGTACTACTATGTACAA44199407GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:26407584-26407603
TCTCTTCAGCAGCATTACTATTCTGTACTG26407584GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTCTTGTTACTGCA
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:48620541-48620560
CATCAGCGGCAGCAGTACTACTATGTACAA48620541GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 8.
OU696684.1:26116362-26116381
TCTCTTCAGCAGCATTACTATTCTGTACTG26116362GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:50348031-50348050
CATCAGCGGCAGCAGTACTACTATGTACAA50348031GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 8.
OU744549.1:26515791-26515810
TCTCTTCAGCAGCATTACTATTCTGTACTG26515791GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 15.
OU744556.1:50251853-50251872
CATCAGCAGCAGCAGTACTACTATGTACAA50251853GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 8.
OU744960.1:26387242-26387261
TCTCTTCAGCAGCATTACTATTCTGTACTG26387242GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTGTTGTTACTGCT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:50725500-50725519
CATCAGCGGCAGCAGTACTACTATGTACAA50725500GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 8.
OU744998.1:27126234-27126253
TCTCTTCAGCAGCATTACTATTCTGTACTG27126234GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTCTTGTTACTGCT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:49819466-49819485
CATCAGCGGCAGCAGTACTACTATGTACAA49819466GTGCACAAACAATCCCTCCTTTTTGATCGTCAAGGCTTCTTGTTACTGCT
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:26589068-26589087
TCTCTTCAGCAGCATTACTATTCTGTACTG26589068GTGCACAAACAATCCCTCCTTTTTTATCATCCATGCTTCTTGTTACTGCT
Crataegus laevigata genome assembly, chromosome: 1.
OY756938.1:5425055-5425074
CACCAGCAGCAGCAGTACTAATATGTACAA5425055GTGCACAAACAATCCCTCCTTTTTGATCATCAAGGCTTCTTGTTACTGCT
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:39707792-39707811
CATCAGCAGCAGCAGTACTACTATGTACAC39707792GTGCACAAACAATCCCTCCTTTTTGACCGTCAAGGCTTCATGTTACTGCT
Pyrus communis genome assembly, chromosome: 15.
OY757082.1:21361894-21361913
TCTCTTAAGCAGCACTACTATTCTGTACTG21361894GTGCACAAACAATCCCTCCTTTTTTTTATCATCCATGCTTGTTCTTACTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aggagggattgtttgtgcac
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aggagggattgtttgtgcac | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.283 | 0.274 | search_plus_done; http://172.18.8.135:50400/match?q=AGGAGGGATTGTTTGTGCAC&k=0&no_gap=0&offset=0&limit=50
0.344 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCACAAACAATCCCTCCT&k=0&no_gap=0&offset=0&limit=40
0.357 | 0.012 | cgi_end;

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