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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:11:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Nicotiana tabacum EST, clone nt005003005.
AM792450.1:344-367
TTGAATCCTTATTTTGTTTTTATGAATCCA344AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
KS15020C08 KS15 Capsicum annuum cDNA, mRNA sequence.
GD065236.1:510-533
TTGGATCCTTATTTTGTTTTCATGAATCCA510AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
KS15044F01 KS15 Capsicum annuum cDNA, mRNA sequence.
GD067540.1:348-371
TTGGATCCTTATTTTGTTTTCATGAATCCA348AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
KS15055D03 KS15 Capsicum annuum cDNA, mRNA sequence.
GD068561.1:347-370
TTGGATCCTTATTTTGTTTTCATGAATCCA347AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
CHO_OF084xi10f1.ab1 CHO_OF Nicotiana tabacum genomic 5', genomic survey sequence.
ET707049.1:344-367
TTGGATCCTTATTTTGTTTTTATGAATCCG344AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
CHO_OF4980xm14f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH434668.1:366-389
TTGGATCCTTATTTTGTTTTTATGAATCCA366AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
CHO_OF4992xp10r1.ab1 CHO_OF4 Nicotiana tabacum genomic 3', genomic survey sequence.
FH436365.1:427-450
TTGGATCCTTATTTTGTTTTTATGAATCCG427AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 9.
CP124711.1:125568726-125568749
TTGGATCCTTATTTTGTATTCATGAATCCA125568726AGGCCAACTTATGAGATCACTTTCTTGAACCAACTCCCTCCTGAGCTCAATTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:210657264-210657287
TTGGATCCTTATTTTGTTTTCATGAATCCA210657264AGGCCAACTTATGAGATCACTTTCTTGAATCAACTCCCTCCTGAGCTCAATTGT
KS08022C05 KS08 Capsicum annuum cDNA, mRNA sequence.
BM068349.1:511-534
ACAATTGAGCTCAGGAGGGAGTTGATTCAA511GAAAGTGATCTCATAAGTTGGCCTTGGATTCATGAAAACAAAATAAGGATCCAA
AGN_PNL221ar1_f9.trimmed.seq AGN_PNL Nicotiana tabacum cDNA 3', mRNA sequence.
FG193968.1:377-400
ACAATTGAGCTCAGGAGGGAGTTGATTCAA377GAAAGTGATCTCATAAGTTGGCCTTGGATTCATAAAAACAAAATAAGGATCCAA
KS15019E07 KS15 Capsicum annuum cDNA, mRNA sequence.
GD065165.1:462-485
ACAATTGAGCTCAGGAGGGAGTTGATTCAA462GAAAGTGATCTCATAAGTTGGCCTTGGATTCATGAAAACAAAATAAGGATCCAA
KS15033B07 KS15 Capsicum annuum cDNA, mRNA sequence.
GD066450.1:484-507
ACAATTGAGCTCAGGAGGGAGTTGATTCAA484GAAAGTGATCTCATAAGTTGGCCTTGGATTCATGAAAACAAAATAAGGATCCAA
TSA: Capsicum annuum MGMT_Contig10680, mRNA sequence.
JW060924.1:550-573
ACAATTGAGCTCAGGAGGGAGTTGATTCAA550GAAAGTGATCTCATAAGTTGGCCTTGGATTCATGAAAACAAAATAAGGATCCAA
CHO_OF084xi10r1.ab1 CHO_OF Nicotiana tabacum genomic 3', genomic survey sequence.
ET707124.1:656-679
ACAATTGAGCTCAGGAGGGAGTTGATTCAA656GAAAGTGATCTCATAAGTTGGCCTCGGATTCATAAAAACAAAATAAAGATCCAA
CHO_OF6516xg19f1.ab1 CHO_OF6 Nicotiana tabacum genomic 5', genomic survey sequence.
FI052798.1:229-252
ACAATTGAGCTCAGGAGGGAGTTGATTCAA229GAAAGTGATCTCATAAGTTGGCCTCGGATTCATAAAAACAAAATAAGGATCCAA
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:56837144-56837167
ACAATTGAGCTCAGGAGGGAGTTGATTCAA56837144GAAAGTGATCTCATAAGTTGGCCTTGGATTCATGAAAACAAAATAAGGATCCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/aggccaacttatgagatcactttc
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : aggccaacttatgagatcactttc | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.559 | 0.550 | search_plus_done; http://172.18.8.135:50400/match?q=AGGCCAACTTATGAGATCACTTTC&k=0&no_gap=0&offset=0&limit=50
0.959 | 0.400 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAGTGATCTCATAAGTTGGCCT&k=0&no_gap=0&offset=0&limit=41
0.964 | 0.006 | cgi_end;

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