GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:22:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ipomoea trifida cultivar NCNSP0306 chromosome 3.
CP025646.1:27099059-27099082
GTTGAAGTGCTAGCATGAGTTCTTCACTAA27099059AGGGATCTGCAAATACAGGACTGCTGGTACTGTATACATCTATAGCTGCTGCCA
Ipomoea nil cDNA clone:jmsf44m16, 5' end.
CJ754732.1:254-277
TGGCAGCAGCTATAGATGTATACAGTAGCA254GCAGTCCTGTATTTGCAGATCCCTTTAGTGAAGAACTCATGCTAGCACTTCAAC
TSA: Ipomoea batatas Contig_43304.Ipbalsr mRNA sequence.
JP147892.1:120-143
TGGCAGCAGCTATAGATGTATACAGTAGCA120GCAGTCCTGTATTTGCAGATCCCTTTAGTGAAGAACTCATGCTAGCACTTCAAC
Ipomoea triloba cultivar NCNSP0323 chromosome 3.
CP025662.1:8113072-8113095
TGGCAGCAGCTATAGATGTATACAGTAGCA8113072GCAGTCCTGTATTTGCAGATCCCTTTAGTGAAGAACTCATGCTAGCACTTCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/agggatctgcaaatacaggactgc
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : agggatctgcaaatacaggactgc | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=AGGGATCTGCAAATACAGGACTGC&k=0&no_gap=0&offset=0&limit=50
0.149 | 0.054 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGTCCTGTATTTGCAGATCCCT&k=0&no_gap=0&offset=0&limit=49
0.151 | 0.002 | cgi_end;

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