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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:17:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

HO01D11S HO Hordeum vulgare cDNA clone HO01D12 5-PRIME, mRNA sequence.
CD054521.1:351-371
GGGCAGTATTCGGTCAAGTCGGACGCCTAC351AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
HO31K09S HO Hordeum vulgare cDNA clone HO31K09 5-PRIME, mRNA sequence.
DN178853.1:453-473
GGGCAGTATTCGGTCAAGTCGGACGCCTAC453AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
HDP40H20w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP40H20, mRNA sequence.
EX585794.1:14-34
GTTTGACGCCTAC14AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
HDP11C04w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP11C04, mRNA sequence.
EX598172.1:14-34
GAAGGACGCCTAC14AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR824637.1:5020673-5020693
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5020673AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828092.1:5249102-5249122
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5249102AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828120.1:4165001-4165021
GGGCAGTATTCGGTCAAGTCGGACGCCTAC4165001AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828151.2:3263945-3263965
GGGCAGTATTCGGTCAAGTCGGACGCCTAC3263945AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
LR828193.1:4009210-4009230
GGGCAGTATTCGGTCAAGTCGGACGCCTAC4009210AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459907.1:5922577-5922597
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5922577AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459921.1:6436820-6436840
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6436820AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX459975.1:8552279-8552299
GGGCAGTATTCGGTCAAGTCGGACGCCTAC8552279AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 6H.
OX459982.1:6611531-6611551
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6611531AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX459989.1:7229395-7229415
GGGCAGTATTCGGTCAAGTCGGACGCCTAC7229395AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460045.1:5316444-5316464
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5316444AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460087.1:5545690-5545710
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5545690AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX460094.1:6755448-6755468
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6755448AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460100.1:8754710-8754730
GGGCAGTATTCGGTCAAGTCGGACGCCTAC8754710AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460122.1:5949557-5949577
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5949557AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX460136.1:6537896-6537916
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6537896AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590746.1:5655249-5655269
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5655249AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX590753.1:7392127-7392147
GGGCAGTATTCGGTCAAGTCGGACGCCTAC7392127AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638754.1:6773953-6773973
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6773953AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638754.1:6839495-6839515
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6839495AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare genome assembly, chromosome: 6H.
OX638761.1:6159947-6159967
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6159947AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638817.1:5885347-5885367
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5885347AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638873.1:6084718-6084738
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6084718AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 6H.
OX638880.1:9089156-9089176
GGGCAGTATTCGGTCAAGTCGGACGCCTAC9089156AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737397.1:8195410-8195430
GGGCAGTATTCGGTCAAGTCGGACGCCTAC8195410AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737404.1:6205940-6205960
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6205940AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737432.1:8298888-8298908
GGGCAGTATTCGGTCAAGTCGGACGCCTAC8298888AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737439.1:3527669-3527689
GGGCAGTATTCGGTCAAGTCGGACGCCTAC3527669AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737494.1:5825152-5825172
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5825152AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737508.1:6351445-6351465
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6351445AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737523.1:6759837-6759857
GGGCAGTATTCGGTCAAGTCGGACGCCTAC6759837AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737530.1:7194856-7194876
GGGCAGTATTCGGTCAAGTCGGACGCCTAC7194856AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737537.1:7467771-7467791
GGGCAGTATTCGGTCAAGTCGGACGCCTAC7467771AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737652.1:5040451-5040471
GGGCAGTATTCGGTCAAGTCGGACGCCTAC5040451AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737871.1:7842800-7842820
GGGCAGTATTCGGTCAAGTCGGACGCCTAC7842800AGTTTCGGCGTTCTGGTATTGGAGATGGTCACCGGAAGGAAGAATAGCAGC
HO02N04w HO Hordeum vulgare cDNA clone HO02N04 3-PRIME, mRNA sequence.
CK566210.1:515-535
GCTGCTATTCTTCCTTCCGGTGACCATCTC515CAATACCAGAACGCCGAAACTGTAGGCGTCCGACTTGACCGAATACTGCCC
HO09C03w HO Hordeum vulgare cDNA clone HO09C03 3-PRIME, mRNA sequence.
CK568167.1:507-527
GCTGCTATTCTTCCTTCCGGTGACCATCTC507CAATACCAGAACGCCGAAACTGTAGGCGTCCGACTTGACCGAATACTGCCC
HO30H15w HO Hordeum vulgare cDNA clone HO30H15 3-PRIME, mRNA sequence.
DN186103.1:586-606
GCTGCTATTCTTCCTTCCGGTGACCATCTC586CAATACCAGAACGCCGAAACTGTAGGCGTCCGACTTGACCGAATACTGCCC
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737616.1:6381796-6381816
GCTGCTATTCTTCCTTCCGGTGACCATCTC6381796CAATACCAGAACGCCGAAACTGTAGGCGTCCGACTTGACCGAATACTGCCC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737623.1:2879691-2879711
GCTGCTATTCTTCCTTCCGGTGACCATCTC2879691CAATACCAGAACGCCGAAACTGTAGGCGTCCGACTTGACCGAATACTGCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/agtttcggcgttctggtattg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : agtttcggcgttctggtattg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.350 | 0.341 | search_plus_done; http://172.18.8.135:50400/match?q=AGTTTCGGCGTTCTGGTATTG&k=0&no_gap=0&offset=0&limit=50
0.554 | 0.204 | search_minus_done; http://172.18.8.135:50400/match?q=CAATACCAGAACGCCGAAACT&k=0&no_gap=0&offset=0&limit=11
0.558 | 0.004 | cgi_end;

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