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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-12 08:01:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:38436137-38436161
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA38436137CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:39413753-39413777
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA39413753CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:36890058-36890082
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA36890058CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:37363697-37363721
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA37363697CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:39735924-39735948
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA39735924CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:38442379-38442403
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA38442379CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus domestica genome assembly, chromosome: 10.
OU696686.1:38965748-38965772
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA38965748CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus domestica genome assembly, chromosome: 10.
OU744551.1:38672132-38672156
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA38672132CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus domestica genome assembly, chromosome: 10.
OU744962.1:39839518-39839542
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA39839518CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus domestica genome assembly, chromosome: 10.
OU745000.1:38465804-38465828
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA38465804CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:37155186-37155210
AGAGAGAGAGAGAGAGAGAGGGTTGAGAAA37155186CTGTGTAGGGTTTTTGTATCCTTATACAAATTTTTATGGGAGTCTGACTTTAAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ataaggatacaaaaaccctacacag
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ataaggatacaaaaaccctacacag | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.370 | 0.361 | search_plus_done; http://172.18.8.135:50400/match?q=ATAAGGATACAAAAACCCTACACAG&k=0&no_gap=0&offset=0&limit=50
0.488 | 0.118 | search_minus_done; http://172.18.8.135:50400/match?q=CTGTGTAGGGTTTTTGTATCCTTAT&k=0&no_gap=0&offset=0&limit=50
0.496 | 0.008 | cgi_end;

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