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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-01-09 03:16:02, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:3849124-3849144
CTCATGCAATTGTCTTCAACATTACCCAAC3849124ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTCTAAAATACC
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141940.1:3922962-3922982
CTCATGCAATTGTCTTCAACATTACCCAAC3922962ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141966.1:3820460-3820480
CTCATGCAATTGTCTTCAACATTACCCAAC3820460ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTATAAAA
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141983.1:3882269-3882289
CTCATGCAATTGTCTTCAACATTACCCAAC3882269ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTCTAAAATACC
Malus ioensis cultivar PI590015 chromosome 14.
CP154754.1:3685748-3685768
CTCATGCAATTGTCTTCAACATTACCCAAC3685748ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTATAAAATACC
Malus x robusta genome assembly, chromosome: 15.
OY720339.1:3828779-3828799
CTCATGCAATTGTCTTCAACATTACCCAAC3828779ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
Crataegus laevigata genome assembly, chromosome: 16.
OY756953.1:4082168-4082188
CTCATGCAATTGTCTTCAACATTACCCAAC4082168ATCCCACAGCTTCTGTTTTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
Deilephila porcellus genome assembly, chromosome: 5.
LR999975.1:11156089-11156109
TATTTTCCTAACGATCTCCGAAAACATACT11156089ATCCCACAGCTTCTGTTTTTGTTCGTCTTCATTTATGAATTCCACTTCTAA
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143371.1:27957415-27957435
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG27957415CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143388.1:24420022-24420042
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG24420022CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica cultivar Red Fuji chromosome 14.
CP147806.1:27981316-27981336
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG27981316CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica cultivar Red Fuji chromosome 14.
CP147815.1:27875225-27875245
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG27875225CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus ioensis cultivar PI590015 chromosome 14.
CP154737.1:28237535-28237555
GGTATTTTATAGAGAGAGAGAGAGAGAGAG28237535CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus coronaria cultivar PI590014 chromosome 14.
CP154771.1:27571499-27571519
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG27571499CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus coronaria cultivar PI590014 chromosome 14.
CP154788.1:27878896-27878916
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG27878896CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Chaenomeles sinensis isolate sampleA chromosome 17.
CP162380.1:25501154-25501174
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG25501154CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica cultivar WA 38 chromosome 14B.
CP165697.1:28133837-28133857
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG28133837CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica cultivar WA 38 chromosome 14A.
CP165714.1:27858873-27858893
GGTATTTTAGAGAGAGAGAGAGAGAGAGAG27858873CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica cultivar Golden Delicious chromosome 14.
CP168778.1:27220282-27220302
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG27220282CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica cultivar Golden Delicious chromosome 14.
CP168795.1:27862033-27862053
GGTATTTTAGAGAGAGAGAGAGAGAGAGAG27862033CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus sylvestris genome assembly, chromosome: 14.
OU696516.1:26431490-26431510
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG26431490CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica genome assembly, chromosome: 14.
OU696690.1:27761249-27761269
GGTATTTTAGAGAGAGAGAGAGAGAGAGAG27761249CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica genome assembly, chromosome: 14.
OU744555.1:28486434-28486454
GGTATTTTAGAGAGAGAGAGAGAGAGAGAG28486434CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica genome assembly, chromosome: 14.
OU744966.1:28516740-28516760
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG28516740CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Malus domestica genome assembly, chromosome: 14.
OU745004.1:28395994-28396014
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG28395994CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Pyrus communis genome assembly, chromosome: 13.
OY757080.1:22895697-22895717
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG22895697CAAAAACAGAAGCTGTGGGATGTTGGGTAATGTTGAAGACAATTGCATGAG
Deilephila elpenor genome assembly, chromosome: 6.
OX457100.1:4862765-4862785
TTAGAAGTGGAATTCATGAATGAAGACGAA4862765CAAAAACAGAAGCTGTGGGATAGTATGTTTTCGGAGATCGTTAGGAAAGTA
Caretta caretta genome assembly, chromosome: SLK063_ragtag_1.
OZ220763.1:34311187-34311207
CACTCGCGTTATTCACTGAAGAACAGGGCT34311187CAAAAACAGAAGCTGTGGGATGGGATAGGGCAGCAGACACCCCTTCCTTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/atcccacagcttctgtttttg
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : atcccacagcttctgtttttg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.213 | 0.204 | search_plus_done; http://172.18.8.135:50800/match?q=ATCCCACAGCTTCTGTTTTTG&k=0&no_gap=0&offset=0&limit=50
0.301 | 0.088 | search_minus_done; http://172.18.8.135:50800/match?q=CAAAAACAGAAGCTGTGGGAT&k=0&no_gap=0&offset=0&limit=42
0.315 | 0.014 | cgi_end;

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